RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 MRPS18AQ9NVS2 196 aaKnown RBP12.17□□□□□ -0.46
NEK4-206ENST00000496822 CHCHD3Q9NX63 227 aaKnown RBP12.17□□□□□ -0.46
NEK4-206ENST00000496822 ERVK13-1Q9NX77 482 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 SESN1Q9Y6P5 492 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 PRKDCP78527 4128 aaKnown RBP12.17□□□□□ -0.46
NEK4-206ENST00000496822 DSCAML1Q8TD84 2053 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 A6NDX4 124 aa12.16□□□□□ -0.46
NEK4-206ENST00000496822 DCKP27707 260 aa12.16□□□□□ -0.46
NEK4-206ENST00000496822 GABARAPL2P60520 117 aa12.16□□□□□ -0.46
NEK4-206ENST00000496822 PRAMEF5Q5TYX0 476 aa12.16□□□□□ -0.46
NEK4-206ENST00000496822 TRAPPC6BQ86SZ2 158 aa12.16□□□□□ -0.46
NEK4-206ENST00000496822 MALSU1Q96EH3 234 aa12.16□□□□□ -0.46
NEK4-206ENST00000496822 COMMD4Q9H0A8 199 aa12.16□□□□□ -0.46
NEK4-206ENST00000496822 TMEM133Q9H2Q1 129 aa12.16□□□□□ -0.46
NEK4-206ENST00000496822 ZCCHC4Q9H5U6 513 aa12.16□□□□□ -0.46
NEK4-206ENST00000496822 NEK6Q9HC98 313 aa12.16□□□□□ -0.46
NEK4-206ENST00000496822 FGF20Q9NP95 211 aaPredicted RBP12.16□□□□□ -0.46
NEK4-206ENST00000496822 PSORS1C1Q9UIG5 152 aa12.16□□□□□ -0.46
NEK4-206ENST00000496822 HILPDAQ9Y5L2 63 aa12.16□□□□□ -0.46
NEK4-206ENST00000496822 XPNPEP2O43895 674 aa12.15□□□□□ -0.46
NEK4-206ENST00000496822 TNFAIP8O95379 198 aa12.15□□□□□ -0.46
NEK4-206ENST00000496822 ERP29P30040 261 aaKnown RBP12.15□□□□□ -0.46
NEK4-206ENST00000496822 GDNFP39905 211 aa12.15□□□□□ -0.46
NEK4-206ENST00000496822 GLIPR1P48060 266 aa12.15□□□□□ -0.46
NEK4-206ENST00000496822 ZP1P60852 638 aa12.15□□□□□ -0.46
NEK4-206ENST00000496822 Q6ZTK2 550 aa12.15□□□□□ -0.46
NEK4-206ENST00000496822 AHSA2Q719I0 299 aa12.15□□□□□ -0.46
NEK4-206ENST00000496822 C1QL4Q86Z23 238 aa12.15□□□□□ -0.46
NEK4-206ENST00000496822 RPS4Y2Q8TD47 263 aa12.15□□□□□ -0.46
NEK4-206ENST00000496822 CFHR4Q92496 578 aa12.15□□□□□ -0.46
NEK4-206ENST00000496822 RGP1Q92546 391 aaPredicted RBP12.15□□□□□ -0.46
NEK4-206ENST00000496822 TMEM80Q96HE8 168 aa12.15□□□□□ -0.46
NEK4-206ENST00000496822 ABCB10Q9NRK6 738 aa12.15□□□□□ -0.46
NEK4-206ENST00000496822 GLS2Q9UI32 602 aa12.15□□□□□ -0.46
NEK4-206ENST00000496822 EXOSC1Q9Y3B2 195 aaKnown RBP12.15□□□□□ -0.46
NEK4-206ENST00000496822 FAM172BPA6NC97 362 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 TMEM212A6NML5 194 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 PTGES3LE9PB15 166 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 SH2D1BO14796 132 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 SULT1B1O43704 296 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 MRPS14O60783 128 aaKnown RBP12.14□□□□□ -0.47
NEK4-206ENST00000496822 HCKP08631 526 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 CSF1P09603 554 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 LIMS3P0CW19 117 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 LIMS4P0CW20 117 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 VSIG10L2P0DP72 767 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 ZNF44P15621 663 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 CRHBPP24387 322 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 GTF2A1P52655 376 aaPredicted RBP12.14□□□□□ -0.47
NEK4-206ENST00000496822 SCN1BQ07699 218 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 AESQ08117 197 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 ST3GAL4Q11206 333 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 CDK5R1Q15078 307 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 MINOS1Q5TGZ0 78 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 XAF1Q6GPH4 301 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 Q6P435 159 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 C11orf88Q6PI97 169 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 SAXO1Q8IYX7 474 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 Q8N2B8 174 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 PARP16Q8N5Y8 322 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 OR51A2Q8NGJ7 313 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 OR4P4Q8NGL7 312 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 OR5AK2Q8NH90 309 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 NDNFQ8TB73 568 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 TSEN15Q8WW01 171 aaKnown RBP12.14□□□□□ -0.47
NEK4-206ENST00000496822 GGHQ92820 318 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 COQ2Q96H96 371 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 NR1H4Q96RI1 486 aaPredicted RBP12.14□□□□□ -0.47
NEK4-206ENST00000496822 CLEC7AQ9BXN2 247 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 SERTAD4Q9NUC0 356 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 ING3Q9NXR8 418 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 DIMT1Q9UNQ2 313 aaKnown RBP12.14□□□□□ -0.47
NEK4-206ENST00000496822 UBE2J1Q9Y385 318 aaPredicted RBP12.14□□□□□ -0.47
NEK4-206ENST00000496822 MINOS1-NBL1R4GNA1 71 aa12.14□□□□□ -0.47
NEK4-206ENST00000496822 TET2Q6N021 2002 aaPredicted RBP12.13□□□□□ -0.47
NEK4-206ENST00000496822 TRGV10A0A0A0MS01 117 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 A0A0G2JK05 382 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 F2RL2O00254 374 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 SLC33A1O00400 549 aaPredicted RBP12.13□□□□□ -0.47
NEK4-206ENST00000496822 RGS10O43665 173 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 TMEM225BP0DP42 221 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 CDK2P24941 298 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 LMO1P25800 156 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 DYNLT3P51808 116 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 GBX2P52951 348 aaPredicted RBP12.13□□□□□ -0.47
NEK4-206ENST00000496822 ATXN7L3Q14CW9 347 aaPredicted RBP12.13□□□□□ -0.47
NEK4-206ENST00000496822 KISS1Q15726 138 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 KCTD21Q4G0X4 260 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 FBLN7Q53RD9 439 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 UTF1Q5T230 341 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 LAIR2Q6ISS4 152 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 Q6ZS46 218 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 SERPINA12Q8IW75 414 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 LYG1Q8N1E2 194 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 HAVCR2Q8TDQ0 301 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 JAM3Q9BX67 310 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 CDCA4Q9BXL8 241 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 PPIL3Q9H2H8 161 aaKnown RBP12.13□□□□□ -0.47
NEK4-206ENST00000496822 DUSP21Q9H596 190 aa12.13□□□□□ -0.47
NEK4-206ENST00000496822 DHDHQ9UQ10 334 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms