RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 LYRM4Q9HD34 91 aa7.91□□□□□ -1.14
HPS4-217ENST00000496385 PRSS50Q9UI38 385 aa7.91□□□□□ -1.14
HPS4-217ENST00000496385 DAPP1Q9UN19 280 aa7.91□□□□□ -1.14
HPS4-217ENST00000496385 RCL1Q9Y2P8 373 aaKnown RBP7.91□□□□□ -1.14
HPS4-217ENST00000496385 TRPM6Q9BX84 2022 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 CEP192Q8TEP8 1941 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 MED19A0JLT2 244 aaPredicted RBP7.9□□□□□ -1.14
HPS4-217ENST00000496385 C4orf47A7E2U8 309 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 SPINT1O43278 529 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 LATO43561 262 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 SMIM10L1P0DMW3 83 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 BMP5P22003 454 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 TPPP2P59282 170 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 RPS15AP62244 130 aaKnown RBP7.9□□□□□ -1.14
HPS4-217ENST00000496385 TPTE2P1Q5T6R2 138 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 WDR25Q64LD2 544 aaPredicted RBP7.9□□□□□ -1.14
HPS4-217ENST00000496385 KCNIP4Q6PIL6 250 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 LIAT1Q6ZQX7 453 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 RNF44Q7L0R7 432 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 C16orf82Q7Z2V1 217 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 TIPARPQ7Z3E1 657 aaKnown RBP7.9□□□□□ -1.14
HPS4-217ENST00000496385 MRGPRGQ86SM5 289 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 C10orf53Q8N6V4 93 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 OR4D5Q8NGN0 318 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 SMIM10Q96HG1 83 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 COX14Q96I36 57 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 ABHD14AQ9BUJ0 271 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 TMEM59Q9BXS4 323 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 WIPI2Q9Y4P8 454 aa7.9□□□□□ -1.14
HPS4-217ENST00000496385 A0A0A6YYD4 124 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 SOCS1O15524 211 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 B3GALT2O43825 422 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 CSTAP01040 98 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 H2BFMP0C1H6 154 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 MDKP21741 143 aaPredicted RBP7.9□□□□□ -1.15
HPS4-217ENST00000496385 TAS2R30P59541 319 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 PRSS8Q16651 343 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 BSXQ3C1V8 233 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 TOMM20LQ6UXN7 152 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 ATG4DQ86TL0 474 aaPredicted RBP7.9□□□□□ -1.15
HPS4-217ENST00000496385 ZNF761Q86XN6 746 aaPredicted RBP7.9□□□□□ -1.15
HPS4-217ENST00000496385 LYG1Q8N1E2 194 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 OR2AJ1Q8NGZ0 328 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 NICN1Q9BSH3 213 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 ZNF552Q9H707 407 aaPredicted RBP7.9□□□□□ -1.15
HPS4-217ENST00000496385 TMEM9BQ9NQ34 198 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 TMEM74BQ9NUR3 256 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 EMC9Q9Y3B6 208 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 SPACA6W5XKT8 324 aa7.9□□□□□ -1.15
HPS4-217ENST00000496385 IGHV2-70DA0A0C4DH43 119 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 A0A1W2PQU0 124 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 IGLON5A6NGN9 336 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 PATE3B3GLJ2 98 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 H7C1C5 153 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 K7ESM1 405 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 XRCC2O43543 280 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 NDUFB8O95169 186 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 GPR75O95800 540 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 DBHP09172 617 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 OR5G3P0C626 314 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 GZMHP20718 246 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 APOBEC3AP31941 199 aaPredicted RBP7.89□□□□□ -1.15
HPS4-217ENST00000496385 LCN6P62502 163 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 GNB2P62879 340 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 SRPXP78539 464 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 MGAT2Q10469 447 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 BATFQ16520 125 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 MAJINQ3KP22 176 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 ADAMTSL4Q6UY14 1074 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 SDSLQ96GA7 329 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 ST6GALNAC5Q9BVH7 336 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 OR51I2Q9H344 312 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 MRPL22Q9NWU5 206 aaKnown RBP7.89□□□□□ -1.15
HPS4-217ENST00000496385 UQCR10Q9UDW1 63 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 MRPS28Q9Y2Q9 187 aaKnown RBP7.89□□□□□ -1.15
HPS4-217ENST00000496385 IGLV1-36A0A0B4J1U3 117 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 PRSS37A4D1T9 235 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 OR6C6A6NF89 314 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 SERINC4A6NH21 518 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 TMEM238C9JI98 176 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 H0Y8X5 98 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 SDCBPO00560 298 aaPredicted RBP7.89□□□□□ -1.15
HPS4-217ENST00000496385 WDR1O75083 606 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 RAD51DO75771 328 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 MPIG6BO95866 241 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 STATHP02808 62 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 PTPRZ1P23471 2315 aaPredicted RBP7.89□□□□□ -1.15
HPS4-217ENST00000496385 FBXO42Q6P3S6 717 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 GLIPR1L1Q6UWM5 242 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 OR10S1Q8NGN2 331 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 NRTNQ99748 197 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 SPIN2AQ99865 258 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 SPIN2BQ9BPZ2 258 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 FBRSQ9HAH7 460 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 GNG13Q9P2W3 67 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 SLC7A11Q9UPY5 501 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 COX11Q9Y6N1 276 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 ZNF292O60281 2723 aa7.89□□□□□ -1.15
HPS4-217ENST00000496385 TRAV30A0A087WSZ9 112 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 PRSS47A8MTI9 375 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms