RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 EPHA1P21709 976 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 FGF9P31371 208 aaPredicted RBP9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 OR3A1P47881 315 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 MEF2CQ06413 473 aaPredicted RBP9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 RAB11BQ15907 218 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 TIMM50Q3ZCQ8 353 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 C1orf100Q5SVJ3 147 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 ATAD3CQ5T2N8 411 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 TMEM200BQ69YZ2 307 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 Q6P435 159 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 C1orf122Q6ZSJ8 110 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 VMO1Q7Z5L0 202 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 TRAPPC6BQ86SZ2 158 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 BPIFB2Q8N4F0 458 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 OR4S1Q8NGB4 309 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 LHX4Q969G2 390 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 CHCHD6Q9BRQ6 235 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 BARHL1Q9BZE3 327 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 SELENOIQ9C0D9 397 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 MS4A7Q9GZW8 240 aaPredicted RBP9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 OR51E2Q9H255 320 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 BANF2Q9H503 90 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 OCEL1Q9H607 264 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 SPACA1Q9HBV2 294 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 TXNL4BQ9NX01 149 aaKnown RBP9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 V9GY05 133 aa9.96□□□□□ -0.82
CSNK1E-213ENST00000495232 LOC100506127A0A0U1RQW1 187 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 A0A1W2PP11 408 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 SLC17A2O00624 439 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 SLC22A1O15245 554 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 BPNT1O95861 308 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 MPIG6BO95866 241 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 CSN2P05814 226 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 MMP9P14780 707 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 RAB3BP20337 219 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 ERP29P30040 261 aaKnown RBP9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 KCNJ3P48549 501 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 P2RX3P56373 397 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 AESQ08117 197 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 ATXN7L3Q14CW9 347 aaPredicted RBP9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 TAF9Q16594 264 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 KRBOX4Q5JUW0 171 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 LYPD6Q86Y78 171 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 KCNG3Q8TAE7 436 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 NEK7Q8TDX7 302 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 FAM46BQ96A09 425 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 KCTD7Q96MP8 289 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 DPCDQ9BVM2 203 aaPredicted RBP9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 SIRPDQ9H106 197 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 METTL8Q9H825 291 aaKnown RBP9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 SIRT7Q9NRC8 400 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 ING3Q9NXR8 418 aa9.95□□□□□ -0.82
CSNK1E-213ENST00000495232 IGHV3OR16-10A0A075B7F0 116 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 TRGV10A0A0A0MS01 117 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 TRAV24A0A0B4J272 114 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 MCRIP1C9JLW8 97 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 ZNF728P0DKX0 622 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 IGHV4-38-2P0DP08 117 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 JUNBP17275 347 aaPredicted RBP9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 GADD45AP24522 165 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 BPIFB3P59826 476 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 GUCA2AQ02747 115 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 RBM39Q14498 530 aaKnown RBP9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 P2RY14Q15391 338 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 HES5Q5TA89 166 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 NCR3LG1Q68D85 454 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 RBMS3Q6XE24 437 aaKnown RBP9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 TPRX1Q8N7U7 411 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 SUMF2Q8NBJ7 301 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 TMEM104Q8NE00 496 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 ZNF418Q8TF45 676 aaPredicted RBP9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 C1orf147Q96MC9 270 aaPredicted RBP9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 ZNF714Q96N38 554 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 TBX15Q96SF7 602 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 TMEM59Q9BXS4 323 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 IFT22Q9H7X7 185 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 STEAP1Q9UHE8 339 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 LINC00312Q9Y6C7 94 aa9.94□□□□□ -0.82
CSNK1E-213ENST00000495232 CUBNO60494 3623 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 MEX3AA1L020 520 aaKnown RBP9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 FAM90A10PA6NDY2 464 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 FAM90A18PA6NE21 464 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 FAM90A16PA6NEW6 464 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 FAM90A20PA6NIJ5 464 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 FAM90A8PA6NJQ4 464 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 FAM90A7PA6NKC0 464 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 TRIM64CA6NLI5 447 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 FAM90A22PA8MWA6 464 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 FAM90A12PA8MX19 464 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 FAM90A5PA8MXJ8 464 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 FAM90A23PA8MXZ1 464 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 FSHBP01225 129 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 FAM90A15PP0C7V4 464 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 FAM90A13PP0C7W8 464 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 FAM90A14PP0C7W9 464 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 FAM90A24PP0C7X0 464 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 VSIG8P0DPA2 414 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 CD37P11049 281 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 CCL3L1P16619 93 aa9.93□□□□□ -0.82
CSNK1E-213ENST00000495232 PRTN3P24158 256 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms