RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 TMEM106BQ9NUM4 274 aa10.13□□□□□ -0.79
UPF3A-210ENST00000493727 RBFOX1Q9NWB1 397 aaKnown RBP10.13□□□□□ -0.79
UPF3A-210ENST00000493727 HIF1ANQ9NWT6 349 aa10.13□□□□□ -0.79
UPF3A-210ENST00000493727 PTTG2Q9NZH5 202 aa10.13□□□□□ -0.79
UPF3A-210ENST00000493727 IL36GQ9NZH8 169 aa10.13□□□□□ -0.79
UPF3A-210ENST00000493727 MTCH1Q9NZJ7 389 aa10.13□□□□□ -0.79
UPF3A-210ENST00000493727 DNAJB11Q9UBS4 358 aa10.13□□□□□ -0.79
UPF3A-210ENST00000493727 OR5V1Q9UGF6 321 aa10.13□□□□□ -0.79
UPF3A-210ENST00000493727 NPTNQ9Y639 398 aa10.13□□□□□ -0.79
UPF3A-210ENST00000493727 IGKV1-12A0A0C4DH73 117 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 FAM25AB3EWG3 89 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 FAM25CB3EWG5 89 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 FAM25GB3EWG6 89 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 RP2O75695 350 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 IGKV1D-12P01611 117 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 MGMTP16455 207 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 CD80P33681 288 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 S100A5P33763 92 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 PMELP40967 661 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 NPBWR2P48146 333 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 SCAND1P57086 179 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 DYNC1I2Q13409 638 aaKnown RBP10.12□□□□□ -0.79
UPF3A-210ENST00000493727 UBE2NLQ5JXB2 153 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 ASCL4Q6XD76 172 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 FAM58AQ8N1B3 248 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 OSR2Q8N2R0 312 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 ZNF418Q8TF45 676 aaPredicted RBP10.12□□□□□ -0.79
UPF3A-210ENST00000493727 URM1Q9BTM9 101 aaKnown RBP10.12□□□□□ -0.79
UPF3A-210ENST00000493727 MMP27Q9H306 513 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 NARFLQ9H6Q4 476 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 RAB22AQ9UL26 194 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 SPATA2Q9UM82 520 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 CACNG2Q9Y698 323 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 TANC2Q9HCD6 1990 aa10.12□□□□□ -0.79
UPF3A-210ENST00000493727 A0A075B6Q4 140 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 A0A1W2PP11 408 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 TMEM14DPA8MWL7 114 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 SRRM5B3KS81 715 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 FAM157AC9JC47 383 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 CLDN25C9JDP6 229 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 WNT9BO14905 357 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 KCNAB3O43448 404 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 HPGDSO60760 199 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 SFTPBP07988 381 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 EGR1P18146 543 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 FGF12P61328 243 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 LMO4P61968 165 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 FAM189A2Q15884 450 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 ZNF181Q2M3W8 571 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 C12orf54Q6X4T0 127 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 PEG10Q86TG7 708 aaKnown RBP10.11□□□□□ -0.79
UPF3A-210ENST00000493727 TMEM104Q8NE00 496 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 OR51T1Q8NGJ9 327 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 OR5H6Q8NGV6 325 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 PHF21AQ96BD5 680 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 TIMD4Q96H15 378 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 C1orf147Q96MC9 270 aaPredicted RBP10.11□□□□□ -0.79
UPF3A-210ENST00000493727 KRTAP4-12Q9BQ66 201 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 NRIP2Q9BQI9 281 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 SELENOIQ9C0D9 397 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 RHOFQ9HBH0 211 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 RHBDL2Q9NX52 303 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 RASL12Q9NYN1 266 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 PFDN2Q9UHV9 154 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 GLS2Q9UI32 602 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 PEX16Q9Y5Y5 336 aa10.11□□□□□ -0.79
UPF3A-210ENST00000493727 IGHV3OR15-7A0A075B7D8 119 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 ISPDA4D126 451 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 METTL21EPA6NDL7 271 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 NUDT19A8MXV4 375 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.1□□□□□ -0.79
UPF3A-210ENST00000493727 F8VVB4 439 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 F8VWA3 439 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 TMEM178BH3BS89 294 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 NOS1APO75052 506 aaPredicted RBP10.1□□□□□ -0.79
UPF3A-210ENST00000493727 CLPXO76031 633 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 VENTXO95231 258 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 ACAA1P09110 424 aaPredicted RBP10.1□□□□□ -0.79
UPF3A-210ENST00000493727 CPT2P23786 658 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 GABRR1P24046 479 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 CFHR2P36980 270 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 TALDO1P37837 337 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 COMPP49747 757 aaPredicted RBP10.1□□□□□ -0.79
UPF3A-210ENST00000493727 QRFPP83859 136 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 UNC119Q13432 240 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 PIGYQ3MUY2 71 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 FAM201AQ5SY85 155 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 ELP2Q6IA86 826 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 ACP7Q6ZNF0 438 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 GCSAMQ8N6F7 178 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 DEFB108BQ8NET1 73 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 RAB1CQ92928 201 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 MRPS24Q96EL2 167 aaKnown RBP10.1□□□□□ -0.79
UPF3A-210ENST00000493727 NXF2Q9GZY0 626 aaKnown RBP10.1□□□□□ -0.79
UPF3A-210ENST00000493727 ATG5Q9H1Y0 275 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 WDR13Q9H1Z4 485 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 ZNF665Q9H7R5 613 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 LPAR2Q9HBW0 351 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 HMG20AQ9NP66 347 aa10.1□□□□□ -0.79
UPF3A-210ENST00000493727 DCAF16Q9NXF7 216 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms