RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 ZNF19P17023 458 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 GLIPR1P48060 266 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 AESQ08117 197 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 ALKBH1Q13686 389 aaKnown RBP13.3□□□□□ -0.28
PTPRU-208ENST00000493601 BAIAP2L2Q6UXY1 529 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 OR10AC1Q8NH08 325 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 MRAPQ8TCY5 172 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 STMN2Q93045 179 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 PHF21AQ96BD5 680 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 PELI1Q96FA3 418 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 C4orf36Q96KX1 117 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 SLC25A33Q9BSK2 321 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 ZCCHC4Q9H5U6 513 aa13.3□□□□□ -0.28
PTPRU-208ENST00000493601 TOR1AO14656 332 aa13.29□□□□□ -0.28
PTPRU-208ENST00000493601 EI24O14681 340 aa13.29□□□□□ -0.28
PTPRU-208ENST00000493601 OR2F2O95006 317 aa13.29□□□□□ -0.28
PTPRU-208ENST00000493601 HCKP08631 526 aa13.29□□□□□ -0.28
PTPRU-208ENST00000493601 PF4V1P10720 104 aa13.29□□□□□ -0.28
PTPRU-208ENST00000493601 CD33P20138 364 aa13.29□□□□□ -0.28
PTPRU-208ENST00000493601 CD24P25063 80 aa13.29□□□□□ -0.28
PTPRU-208ENST00000493601 CD83Q01151 205 aa13.29□□□□□ -0.28
PTPRU-208ENST00000493601 SCN1BQ07699 218 aa13.29□□□□□ -0.28
PTPRU-208ENST00000493601 KRBOX4Q5JUW0 171 aa13.29□□□□□ -0.28
PTPRU-208ENST00000493601 CCDC144NLQ6NUI1 221 aa13.29□□□□□ -0.28
PTPRU-208ENST00000493601 CENPVQ7Z7K6 275 aaPredicted RBP13.29□□□□□ -0.28
PTPRU-208ENST00000493601 PYDC1Q8WXC3 89 aa13.29□□□□□ -0.28
PTPRU-208ENST00000493601 ZNF286AQ9HBT8 521 aa13.29□□□□□ -0.28
PTPRU-208ENST00000493601 OR6C3Q9NZP0 311 aa13.29□□□□□ -0.28
PTPRU-208ENST00000493601 EXOGQ9Y2C4 368 aaKnown RBP13.29□□□□□ -0.28
PTPRU-208ENST00000493601 A0A087X0M5 115 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 A0A1B0GX30 115 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 ZNF729A6NN14 1252 aaPredicted RBP13.28□□□□□ -0.28
PTPRU-208ENST00000493601 OOSP1A8MZH6 123 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 SLC33A1O00400 549 aaPredicted RBP13.28□□□□□ -0.28
PTPRU-208ENST00000493601 SULT1B1O43704 296 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 ALX3O95076 343 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 TMEM225BP0DP42 221 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 DBTP11182 482 aaKnown RBP13.28□□□□□ -0.28
PTPRU-208ENST00000493601 MNDAP41218 407 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 ALDH3A2P51648 485 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 PRRX1P54821 245 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 LOXL3P58215 753 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 GALEQ14376 348 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 ATXN7L3Q14CW9 347 aaPredicted RBP13.28□□□□□ -0.28
PTPRU-208ENST00000493601 HLA-DRB5Q30154 266 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 ABCA11PQ4W5N1 156 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 TPTE2P1Q5T6R2 138 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 Q6P435 159 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 SERPINA12Q8IW75 414 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 SYS1Q8N2H4 156 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 OR4X2Q8NGF9 303 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 OR5D14Q8NGL3 314 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 CPNE2Q96FN4 548 aaPredicted RBP13.28□□□□□ -0.28
PTPRU-208ENST00000493601 COQ2Q96H96 371 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 RBM14Q96PK6 669 aaKnown RBP13.28□□□□□ -0.28
PTPRU-208ENST00000493601 ALG8Q9BVK2 526 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 AURKAIP1Q9NWT8 199 aaPredicted RBP13.28□□□□□ -0.28
PTPRU-208ENST00000493601 MYRFQ9Y2G1 1151 aa13.28□□□□□ -0.28
PTPRU-208ENST00000493601 TMEM212A6NML5 194 aa13.27□□□□□ -0.29
PTPRU-208ENST00000493601 BUB1B-PAK6H3BSN5 160 aa13.27□□□□□ -0.29
PTPRU-208ENST00000493601 M0QZK8 103 aa13.27□□□□□ -0.29
PTPRU-208ENST00000493601 DEGS1O15121 323 aa13.27□□□□□ -0.29
PTPRU-208ENST00000493601 PF4P02776 101 aa13.27□□□□□ -0.29
PTPRU-208ENST00000493601 LPLP06858 475 aa13.27□□□□□ -0.29
PTPRU-208ENST00000493601 GDNFP39905 211 aa13.27□□□□□ -0.29
PTPRU-208ENST00000493601 ZP1P60852 638 aa13.27□□□□□ -0.29
PTPRU-208ENST00000493601 MRPL28Q13084 256 aaKnown RBP13.27□□□□□ -0.29
PTPRU-208ENST00000493601 RBM39Q14498 530 aaKnown RBP13.27□□□□□ -0.29
PTPRU-208ENST00000493601 KISS1Q15726 138 aa13.27□□□□□ -0.29
PTPRU-208ENST00000493601 RNF144BQ7Z419 303 aa13.27□□□□□ -0.29
PTPRU-208ENST00000493601 LGALS12Q96DT0 336 aa13.27□□□□□ -0.29
PTPRU-208ENST00000493601 PCDHB16Q9NRJ7 776 aa13.27□□□□□ -0.29
PTPRU-208ENST00000493601 ING3Q9NXR8 418 aa13.27□□□□□ -0.29
PTPRU-208ENST00000493601 AMMECR1Q9Y4X0 333 aaPredicted RBP13.27□□□□□ -0.29
PTPRU-208ENST00000493601 TSSC4Q9Y5U2 329 aaPredicted RBP13.27□□□□□ -0.29
PTPRU-208ENST00000493601 KBTBD11-OT1A0A1B0GTJ5 212 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 TCRBV4S1A1TA0A5B7 111 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 E9PQ18 207 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 CCDC159P0C7I6 412 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 NFYBP25208 207 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 GLP1RP43220 463 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 OR3A4PP47883 348 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 MTNR1BP49286 362 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 SLC35A2P78381 396 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 CDK5R1Q15078 307 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 ZIK1Q3SY52 487 aaPredicted RBP13.26□□□□□ -0.29
PTPRU-208ENST00000493601 TCTEX1D4Q5JR98 221 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 ZFP1Q6P2D0 407 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 CCDC121Q6ZUS5 278 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 PARP16Q8N5Y8 322 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 WFDC9Q8NEX5 89 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 OR51T1Q8NGJ9 327 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 OR5AK2Q8NH90 309 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 TSEN15Q8WW01 171 aaKnown RBP13.26□□□□□ -0.29
PTPRU-208ENST00000493601 PPIL3Q9H2H8 161 aaKnown RBP13.26□□□□□ -0.29
PTPRU-208ENST00000493601 INPP5EQ9NRR6 644 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 DHDHQ9UQ10 334 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 GMPPBQ9Y5P6 360 aa13.26□□□□□ -0.29
PTPRU-208ENST00000493601 H0YJX3 145 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 LY6LH3BQJ8 138 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms