RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 CCL13Q99616 98 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 TMEM246Q9BRR3 403 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 MIXL1Q9H2W2 232 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 ZNF665Q9H7R5 613 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 TMEM165Q9HC07 324 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 DIABLOQ9NR28 239 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 EXTL2Q9UBQ6 330 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 PCDHB10Q9UN67 800 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 IGKV1D-17A0A075B6S4 117 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 FAM90A10PA6NDY2 464 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 FAM90A18PA6NE21 464 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 FAM90A16PA6NEW6 464 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 FAM90A20PA6NIJ5 464 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 FAM90A8PA6NJQ4 464 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 FAM90A7PA6NKC0 464 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 FAM90A22PA8MWA6 464 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 FAM90A12PA8MX19 464 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 FAM90A5PA8MXJ8 464 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 FAM90A23PA8MXZ1 464 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 HSPB6O14558 160 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 SOCS1O15524 211 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 ADAM20O43506 726 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 SCGNO76038 276 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 OR2H2O95918 312 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 FAM90A15PP0C7V4 464 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 FAM90A13PP0C7W8 464 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 FAM90A14PP0C7W9 464 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 FAM90A24PP0C7X0 464 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 DVL1P1P54792 670 aaPredicted RBP11.18□□□□□ -0.62
MSH6-208ENST00000493177 COL10A1Q03692 680 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 MOGAT2Q3SYC2 334 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 Q6P435 159 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 LRRC28Q86X40 367 aaPredicted RBP11.18□□□□□ -0.62
MSH6-208ENST00000493177 IZUMO1Q8IYV9 350 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 SPICQ8N5J4 248 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 CD177Q8N6Q3 437 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 ASCC1Q8N9N2 400 aaKnown RBP11.18□□□□□ -0.62
MSH6-208ENST00000493177 OR10R2Q8NGX6 335 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 ANGPTL6Q8NI99 470 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 NEK7Q8TDX7 302 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 DIRAS2Q96HU8 199 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 ABCG5Q9H222 651 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 ZNF581Q9P0T4 197 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 METRNQ9UJH8 293 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 TLN2Q9Y4G6 2542 aa11.18□□□□□ -0.62
MSH6-208ENST00000493177 NSD1Q96L73 2696 aaPredicted RBP11.17□□□□□ -0.62
MSH6-208ENST00000493177 TRAV18A0A075B6X5 111 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 CEACAM18A8MTB9 384 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 RNF212BA8MTL3 300 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 FAM157AC9JC47 383 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 H3BUI4 141 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 TMPRSS2O15393 492 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 NDUFA2O43678 99 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 PDCD6O75340 191 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 MSMBP08118 114 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 CDK2P24941 298 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 TMEM155Q4W5P6 130 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 PAN3Q58A45 887 aaKnown RBP11.17□□□□□ -0.62
MSH6-208ENST00000493177 TMEM69Q5SWH9 247 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 RAB12Q6IQ22 244 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 CNIH2Q6PI25 160 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 BRICD5Q6PL45 260 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 DCDC5Q6ZRR9 648 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 Q6ZTK2 550 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 SLC36A1Q7Z2H8 476 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 FAM89BQ8N5H3 189 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 SUMF2Q8NBJ7 301 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 TMEM185AQ8NFB2 350 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 OR6Q1Q8NGQ2 317 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 PPP1R35Q8TAP8 253 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 TMEM186Q96B77 213 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 RAB3CQ96E17 227 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 GAFA1Q96PS6 74 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 SPACA1Q9HBV2 294 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 PLEKHJ1Q9NW61 149 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 HIF1ANQ9NWT6 349 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 ZNF222Q9UK12 451 aa11.17□□□□□ -0.62
MSH6-208ENST00000493177 MRPS7Q9Y2R9 242 aaKnown RBP11.17□□□□□ -0.62
MSH6-208ENST00000493177 A0A0A6YYH2 397 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 TRAV24A0A0B4J272 114 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 UBE2QL1A1L167 161 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 A6NJ64 397 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 MCRIP1C9JLW8 97 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 RAB27BO00194 218 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 SLC33A1O00400 549 aaPredicted RBP11.16□□□□□ -0.62
MSH6-208ENST00000493177 RPS2P15880 293 aaKnown RBP11.16□□□□□ -0.62
MSH6-208ENST00000493177 FUT3P21217 361 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 TNFSF8P32971 234 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 IL13RA1P78552 427 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 FAHD2BQ6P2I3 314 aaPredicted RBP11.16□□□□□ -0.62
MSH6-208ENST00000493177 LYPD2Q6UXB3 125 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 ZNF788Q6ZQV5 615 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 C6orf201Q7Z4U5 140 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 BPIFB2Q8N4F0 458 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 ZNF561Q8N587 486 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 FAM216BQ8N7L0 139 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 OR4M1Q8NGD0 313 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 OR8B3Q8NGG8 313 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 SDSLQ96GA7 329 aa11.16□□□□□ -0.62
MSH6-208ENST00000493177 FAHD2AQ96GK7 314 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms