RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 GAGE7O76087 117 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 CDRT1O95170 752 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF682O95780 498 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 PMP2P02689 132 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 TTRP02766 147 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 ADRA2AP08913 450 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 GAGE12FP0CL80 117 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 GAGE12GP0CL81 117 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 GAGE12IP0CL82 117 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 FAM236CP0DP71 79 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 ACP2P11117 423 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 BCKDHAP12694 445 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 CD99P14209 185 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 GM2AP17900 193 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 CD58P19256 250 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 WT1P19544 449 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-220ENST00000492859 CSRP1P21291 193 aaKnown RBP3.54□□□□□ -1.84
BRCA1-220ENST00000492859 EVI2AP22794 236 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 CRHBPP24387 322 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 OPRL1P41146 370 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 FKBP3Q00688 224 aaKnown RBP3.54□□□□□ -1.84
BRCA1-220ENST00000492859 FOXF2Q12947 444 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 GAGE4Q13068 117 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 LY6DQ14210 128 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF266Q14584 549 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 LRRC37A5PQ49AS3 106 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 PLPP4Q5VZY2 271 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 SLC18B1Q6NT16 456 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 C8orf82Q6P1X6 216 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-220ENST00000492859 IL34Q6ZMJ4 242 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 Q6ZVH6 145 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 NEGR1Q7Z3B1 354 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 CBLN2Q8IUK8 224 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 GAPTQ8N292 157 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 TMEM178AQ8NBL3 297 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 KLHDC9Q8NEP7 349 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 OR2T12Q8NG77 320 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 OR5A2Q8NGI9 324 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 SPATA3Q8NHX4 192 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 RXFP4Q8TDU9 374 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 TMEM174Q8WUU8 243 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-220ENST00000492859 DLX4Q92988 240 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-220ENST00000492859 PNPLA2Q96AD5 504 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 SLC35E1Q96K37 410 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 OR4K3Q96R72 315 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 SH3BGRL3Q9H299 93 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 ARRDC1-AS1Q9H2J1 176 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 NRN1Q9NPD7 142 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 AKIP1Q9NQ31 210 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 ACER3Q9NUN7 267 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 ASIC5Q9NY37 505 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 TAS2R5Q9NYW4 299 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 COMMD3Q9UBI1 195 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 NAT8Q9UHE5 227 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 MCTS1Q9ULC4 181 aaKnown RBP3.54□□□□□ -1.84
BRCA1-220ENST00000492859 POLR1DQ9Y2S0 133 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 COX11Q9Y6N1 276 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 SIPA1L1O43166 1804 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 TRIP11Q15643 1979 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 IQCMA0A1B0GVH7 501 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-220ENST00000492859 A0A1B0GW64 132 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 A0A1W2PP11 408 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF814B7Z6K7 855 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 M0R2Z0 102 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 MRPS12O15235 138 aaKnown RBP3.53□□□□□ -1.84
BRCA1-220ENST00000492859 TRIAP1O43715 76 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 LYPD3O95274 346 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 CLDN14O95500 239 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 CD2P06729 351 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 OR5AL1P0C617 328 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 HLA-EP13747 358 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 MYOD1P15172 320 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 SPINK2P20155 84 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 MYL9P24844 172 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 MIPP30301 263 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 AGTR1P30556 359 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 RPL4P36578 427 aaKnown RBP3.53□□□□□ -1.84
BRCA1-220ENST00000492859 CXCL12P48061 93 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 OR12D2P58182 307 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 S100A10P60903 97 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 SUMO2P61956 95 aaKnown RBP3.53□□□□□ -1.84
BRCA1-220ENST00000492859 BTG2P78543 158 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 FZD2Q14332 565 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 RBM39Q14498 530 aaKnown RBP3.53□□□□□ -1.84
BRCA1-220ENST00000492859 LAGE3Q14657 143 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 ANXA2RQ3ZCQ2 193 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 FRG2Q64ET8 278 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 OR4C11Q6IEV9 310 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 RPL22L1Q6P5R6 122 aaKnown RBP3.53□□□□□ -1.84
BRCA1-220ENST00000492859 IGFL2Q6UWQ7 119 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 IZUMO2Q6UXV1 221 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 GOLT1AQ6ZVE7 132 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF720Q7Z2F6 126 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 SERPINA11Q86U17 422 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 TMEM139Q8IV31 216 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 TEX45Q8NA69 505 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 OR5A1Q8NGJ0 315 aa3.53□□□□□ -1.84
BRCA1-220ENST00000492859 OR52E2Q8NGJ4 325 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms