RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 TRIM77I1YAP6 450 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 SLC33A1O00400 549 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-215ENST00000492451 RGS9O75916 674 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-215ENST00000492451 VENTXO95231 258 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 RBP4P02753 201 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 CSN2P05814 226 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 GTF2F2P13984 249 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 P2RX3P56373 397 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 RPS25P62851 125 aaKnown RBP11.33□□□□□ -0.6
PTPN7-215ENST00000492451 INSL4Q14641 139 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 GLT8D1Q68CQ7 371 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 ZNF773Q6PK81 442 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 SPARTQ8N0X7 666 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 SIGLECL1Q8N7X8 197 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 OR10K1Q8NGX5 313 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 MUL1Q969V5 352 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 MRPS24Q96EL2 167 aaKnown RBP11.33□□□□□ -0.6
PTPN7-215ENST00000492451 NKX3-1Q99801 234 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-215ENST00000492451 GHRLQ9UBU3 117 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 ST3GAL6Q9Y274 331 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 SF3B6Q9Y3B4 125 aaKnown RBP11.33□□□□□ -0.6
PTPN7-215ENST00000492451 LINC00312Q9Y6C7 94 aa11.33□□□□□ -0.6
PTPN7-215ENST00000492451 A0A087WXM4 84 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 RNASEK-C17orf49H0YIS7 233 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 UBBP0CG47 229 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 ZNF728P0DKX0 622 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 SERPINA2P20848 420 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 UBE2E1P51965 193 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 GP2P55259 537 aaKnown RBP11.32□□□□□ -0.6
PTPN7-215ENST00000492451 RBM11P57052 281 aaKnown RBP11.32□□□□□ -0.6
PTPN7-215ENST00000492451 ERVFRD-1P60508 538 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 ZNF273Q14593 569 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 MPV17LQ2QL34 196 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 PIGYQ3MUY2 71 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 SLC22A6Q4U2R8 563 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 FAM27D1Q5T7N8 215 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 UBE2UQ5VVX9 321 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 RUSC1-AS1Q66K80 236 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 AWAT2Q6E213 333 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 GLIPR1L1Q6UWM5 242 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 TMEM91Q6ZNR0 172 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 LRRTM1Q86UE6 522 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 LYPD6Q86Y78 171 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 TNFRSF14Q92956 283 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 ZDHHC16Q969W1 377 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 ZNF714Q96N38 554 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 PPA2Q9H2U2 334 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 PRDM13Q9H4Q3 707 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 IFT22Q9H7X7 185 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 HEXA-AS1Q9H8Q6 139 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 ZMAT3Q9HA38 289 aaKnown RBP11.32□□□□□ -0.6
PTPN7-215ENST00000492451 UBE2J1Q9Y385 318 aaPredicted RBP11.32□□□□□ -0.6
PTPN7-215ENST00000492451 DSCAML1Q8TD84 2053 aa11.32□□□□□ -0.6
PTPN7-215ENST00000492451 TRGV10A0A0A0MS01 117 aa11.31□□□□□ -0.6
PTPN7-215ENST00000492451 C17orf98A8MV24 154 aa11.31□□□□□ -0.6
PTPN7-215ENST00000492451 CCL3L1P16619 93 aa11.31□□□□□ -0.6
PTPN7-215ENST00000492451 GALP22466 123 aa11.31□□□□□ -0.6
PTPN7-215ENST00000492451 RANBP1P43487 201 aa11.31□□□□□ -0.6
PTPN7-215ENST00000492451 KCNJ3P48549 501 aa11.31□□□□□ -0.6
PTPN7-215ENST00000492451 FABP5Q01469 135 aa11.31□□□□□ -0.6
PTPN7-215ENST00000492451 BAMBIQ13145 260 aa11.31□□□□□ -0.6
PTPN7-215ENST00000492451 DEFB112Q30KQ8 113 aa11.31□□□□□ -0.6
PTPN7-215ENST00000492451 PAN3Q58A45 887 aaKnown RBP11.31□□□□□ -0.6
PTPN7-215ENST00000492451 PDZD9Q8IXQ8 264 aa11.31□□□□□ -0.6
PTPN7-215ENST00000492451 OR4D6Q8NGJ1 314 aa11.31□□□□□ -0.6
PTPN7-215ENST00000492451 ZNF48Q96MX3 618 aaPredicted RBP11.31□□□□□ -0.6
PTPN7-215ENST00000492451 PPIL3Q9H2H8 161 aaKnown RBP11.31□□□□□ -0.6
PTPN7-215ENST00000492451 NDUFB11Q9NX14 153 aa11.31□□□□□ -0.6
PTPN7-215ENST00000492451 FAM96BQ9Y3D0 163 aa11.31□□□□□ -0.6
PTPN7-215ENST00000492451 ANK2Q01484 3957 aa11.31□□□□□ -0.6
PTPN7-215ENST00000492451 H3BUI4 141 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 CCRL2O00421 344 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 NPFFO15130 113 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 OR7C1O76099 320 aaPredicted RBP11.3□□□□□ -0.6
PTPN7-215ENST00000492451 DLX6P56179 175 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 AESQ08117 197 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 SSX1Q16384 188 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 MIDNQ504T8 468 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 KRBOX4Q5JUW0 171 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 C1orf100Q5SVJ3 147 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 TRAPPC6BQ86SZ2 158 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 C11orf42Q8N5U0 333 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 TPRX1Q8N7U7 411 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 ZDHHC22Q8N966 263 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 TSPAN14Q8NG11 270 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 FAM216AQ8WUB2 273 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 CORO2AQ92828 525 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 BARHL1Q9BZE3 327 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 CST11Q9H112 138 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 GAL3ST2Q9H3Q3 398 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 NCOR1P1Q9H4R4 102 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 SPACA1Q9HBV2 294 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 TAS2R3Q9NYW6 316 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 OR6C3Q9NZP0 311 aa11.3□□□□□ -0.6
PTPN7-215ENST00000492451 TRAV24A0A0B4J272 114 aa11.29□□□□□ -0.6
PTPN7-215ENST00000492451 ODAMA1E959 279 aa11.29□□□□□ -0.6
PTPN7-215ENST00000492451 FAM90A10PA6NDY2 464 aa11.29□□□□□ -0.6
PTPN7-215ENST00000492451 FAM90A18PA6NE21 464 aa11.29□□□□□ -0.6
PTPN7-215ENST00000492451 FAM90A16PA6NEW6 464 aa11.29□□□□□ -0.6
PTPN7-215ENST00000492451 DNAJC9-AS1A6NH13 148 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms