RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 BRS3P32247 399 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 PTGFRP43088 359 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 ZP1P60852 638 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 BDH1Q02338 343 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 KPNB1Q14974 876 aaKnown RBP10.92□□□□□ -0.66
COL6A3-211ENST00000491233 FBLN7Q53RD9 439 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 KRBOX4Q5JUW0 171 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 LPCAT4Q643R3 524 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 Q6P435 159 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 C16orf82Q7Z2V1 217 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 LHFPL3Q86UP9 236 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 CBR4Q8N4T8 237 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 CAPSLQ8WWF8 208 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 CORO2AQ92828 525 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 MRPL48Q96GC5 212 aaKnown RBP10.92□□□□□ -0.66
COL6A3-211ENST00000491233 OCSTAMPQ9BR26 566 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 SLC25A33Q9BSK2 321 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 PPIL3Q9H2H8 161 aaKnown RBP10.92□□□□□ -0.66
COL6A3-211ENST00000491233 LIN7BQ9HAP6 207 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 MYRFQ9Y2G1 1151 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 GMPPBQ9Y5P6 360 aa10.92□□□□□ -0.66
COL6A3-211ENST00000491233 LEUTXA8MZ59 168 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 H3BUI4 141 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 SULT1B1O43704 296 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 ZFPL1O95159 310 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 TMEM225BP0DP42 221 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 GABRB1P18505 474 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 ARHGDIBP52566 201 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 GALEQ14376 348 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 HLA-DRB5Q30154 266 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 Q6ZPA2 131 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 REC114Q7Z4M0 266 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 SYS1Q8N2H4 156 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 CHST4Q8NCG5 386 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 OR5AU1Q8NGC0 362 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 OR4D6Q8NGJ1 314 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 TSEN15Q8WW01 171 aaKnown RBP10.91□□□□□ -0.66
COL6A3-211ENST00000491233 AKR1E2Q96JD6 320 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 ISG20L2Q9H9L3 353 aaKnown RBP10.91□□□□□ -0.66
COL6A3-211ENST00000491233 RHOFQ9HBH0 211 aa10.91□□□□□ -0.66
COL6A3-211ENST00000491233 SH2D7A6NKC9 451 aaPredicted RBP10.9□□□□□ -0.66
COL6A3-211ENST00000491233 TMEM212A6NML5 194 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 ZNF729A6NN14 1252 aaPredicted RBP10.9□□□□□ -0.66
COL6A3-211ENST00000491233 E9PI62 339 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 HSPB6O14558 160 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 TOR1AO14656 332 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 DEGS1O15121 323 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 PIN1P1O15428 100 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 GLP1RP43220 463 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 MTNR1BP49286 362 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 RBM39Q14498 530 aaKnown RBP10.9□□□□□ -0.66
COL6A3-211ENST00000491233 CDK5R1Q15078 307 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 KISS1Q15726 138 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 ZSCAN26Q16670 478 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 C17orf58Q2M2W7 97 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 ABCA11PQ4W5N1 156 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 UTF1Q5T230 341 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 TPTE2P1Q5T6R2 138 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 ZNF691Q5VV52 312 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 ZFP1Q6P2D0 407 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 STMN2Q93045 179 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 PHF21AQ96BD5 680 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 MYCBPQ99417 103 aaPredicted RBP10.9□□□□□ -0.66
COL6A3-211ENST00000491233 PDCD1LG2Q9BQ51 273 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 AMBNQ9NP70 447 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 ERVK13-1Q9NX77 482 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 DHDHQ9UQ10 334 aa10.9□□□□□ -0.66
COL6A3-211ENST00000491233 A0A087X0M5 115 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 A0A1B0GX30 115 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 H0YJX3 145 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 BUB1B-PAK6H3BSN5 160 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 OR2F2O95006 317 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 ALX3O95076 343 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 FADS2O95864 444 aaKnown RBP10.89□□□□□ -0.67
COL6A3-211ENST00000491233 LPLP06858 475 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 CCDC159P0C7I6 412 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 PF4V1P10720 104 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 NFYBP25208 207 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 CEACAM3P40198 252 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 OR3A4PP47883 348 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 CD83Q01151 205 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 MRPL28Q13084 256 aaKnown RBP10.89□□□□□ -0.67
COL6A3-211ENST00000491233 PAN3Q58A45 887 aaKnown RBP10.89□□□□□ -0.67
COL6A3-211ENST00000491233 CCDC121Q6ZUS5 278 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 SERPINA12Q8IW75 414 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 PARP16Q8N5Y8 322 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 OR5AK2Q8NH90 309 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 MRAPQ8TCY5 172 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 SGCDQ92629 289 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 CREB3L1Q96BA8 519 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 KIRREL1Q96J84 757 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 RBM14Q96PK6 669 aaKnown RBP10.89□□□□□ -0.67
COL6A3-211ENST00000491233 ZNF649Q9BS31 505 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 INPP5EQ9NRR6 644 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 NECAP2Q9NVZ3 263 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 AURKAIP1Q9NWT8 199 aaPredicted RBP10.89□□□□□ -0.67
COL6A3-211ENST00000491233 OR6C3Q9NZP0 311 aa10.89□□□□□ -0.67
COL6A3-211ENST00000491233 GABRPO00591 440 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 MPZL2O60487 215 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 CD33P20138 364 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms