RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ADAD2Q8NCV1 583 aaKnown RBP11.74□□□□□ -0.53
SMPD4-219ENST00000491128 DPCDQ9BVM2 203 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-219ENST00000491128 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMPD4-219ENST00000491128 ZNF69Q9UC07 566 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 NDRG3Q9UGV2 375 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 RFPL4AA6NLU0 287 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 DISC1C4P0D8 188 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 MCRIP1C9JLW8 97 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 RFPL4AL1F8VTS6 287 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 SELENOVP59797 346 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 NCMAPQ5T1S8 102 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 DEFB108BQ8NET1 73 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 PIK3IP1Q96FE7 263 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 MEGF10Q96KG7 1140 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 OR51J1Q9H342 316 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 ESRP2Q9H6T0 727 aaKnown RBP11.74□□□□□ -0.53
SMPD4-219ENST00000491128 SCP2D1Q9UJQ7 156 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 TMEM210A6NLX4 147 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 SSNA1O43805 119 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 CYB5R3P00387 301 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-219ENST00000491128 TUBG1P23258 451 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 RPS23P62266 143 aaKnown RBP11.74□□□□□ -0.53
SMPD4-219ENST00000491128 TNFAIP6P98066 277 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-219ENST00000491128 ATPAF1Q5TC12 328 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-219ENST00000491128 OR5AP2Q8NGF4 316 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 OR6F1Q8NGZ6 308 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 PLPPR1Q8TBJ4 325 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 WDR89Q96FK6 387 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-219ENST00000491128 ST6GAL2Q96JF0 529 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 C12orf4Q9NQ89 552 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 TUBG2Q9NRH3 451 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 PRR13Q9NZ81 148 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 ANXA10Q9UJ72 324 aa11.74□□□□□ -0.53
SMPD4-219ENST00000491128 TACC2O95359 2948 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 CRYBG3Q68DQ2 2970 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 TMEM82A0PJX8 343 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 SCTP09683 121 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 AKR1C4P17516 323 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 NAT1P18440 290 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 BTG1P62324 171 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 TFF3Q07654 80 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 C4orf46Q504U0 113 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 PAN3Q58A45 887 aaKnown RBP11.73□□□□□ -0.53
SMPD4-219ENST00000491128 NUP37Q8NFH4 326 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 OR11H7Q8NGC8 314 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 ANAPC10Q9UM13 185 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 NOP16Q9Y3C1 178 aaKnown RBP11.73□□□□□ -0.53
SMPD4-219ENST00000491128 KIAA2026Q5HYC2 2103 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 OR5H14A6NHG9 310 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 HMX3A6NHT5 357 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 SLC33A1O00400 549 aaPredicted RBP11.73□□□□□ -0.53
SMPD4-219ENST00000491128 HAND1O96004 215 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 NFYAP23511 347 aaPredicted RBP11.73□□□□□ -0.53
SMPD4-219ENST00000491128 RRAS2P62070 204 aaPredicted RBP11.73□□□□□ -0.53
SMPD4-219ENST00000491128 MEF2DQ14814 521 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 NDUFA5Q16718 116 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 LIN54Q6MZP7 749 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 GCSAMQ8N6F7 178 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 POC1AQ8NBT0 407 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 RCC2Q9P258 522 aaKnown RBP11.73□□□□□ -0.53
SMPD4-219ENST00000491128 ZNF221Q9UK13 617 aa11.73□□□□□ -0.53
SMPD4-219ENST00000491128 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-219ENST00000491128 C19orf84I3L1E1 186 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 BET1O15155 118 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 SERPINF1P36955 418 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 FXYD4P59646 89 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 SEC61A1P61619 476 aaKnown RBP11.72□□□□□ -0.53
SMPD4-219ENST00000491128 ACP7Q6ZNF0 438 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 OVCH2Q7RTZ1 564 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 ZNF2Q9BSG1 426 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-219ENST00000491128 MED28Q9H204 178 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 ZNF222Q9UK12 451 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 A0A1B0GW55 424 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 CD3EP07766 207 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 DUX4L2P0CJ85 424 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 DUX4L3P0CJ86 424 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 DUX4L4P0CJ87 422 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 DUX4L5P0CJ88 424 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 DUX4L6P0CJ89 424 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 DUX4L7P0CJ90 424 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 SELLP14151 372 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 CD80P33681 288 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 CBX5P45973 191 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 GABRA2P47869 451 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 C2orf68Q2NKX9 166 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 MPV17LQ2QL34 196 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 FBXL19-AS1Q494R0 122 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 NHLRC3Q5JS37 347 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 AADACL3Q5VUY0 350 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 FAM53AQ6NSI3 398 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-219ENST00000491128 DUX4L9Q6RFH8 374 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-219ENST00000491128 TMEM17Q86X19 198 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 C1orf174Q8IYL3 243 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 LILRB1Q8NHL6 650 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-219ENST00000491128 TOMM40LQ969M1 308 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 CHIAQ9BZP6 476 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 GCM1Q9NP62 436 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 NGBQ9NPG2 151 aa11.72□□□□□ -0.53
SMPD4-219ENST00000491128 CISD1Q9NZ45 108 aaKnown RBP11.72□□□□□ -0.53
SMPD4-219ENST00000491128 DUX4Q9UBX2 424 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms