RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 VCX3BQ9H321 246 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 ZCCHC4Q9H5U6 513 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 HEXA-AS1Q9H8Q6 139 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 LINC00574Q9H8X3 128 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 TCF7L1Q9HCS4 588 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 INPP5EQ9NRR6 644 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 HUWE1Q7Z6Z7 4374 aaKnown RBP9.47□□□□□ -0.89
SRSF4-204ENST00000489898 RYR3Q15413 4870 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 TRBV5-5A0A0J9YX44 114 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 ODAMA1E959 279 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 TMEM212A6NML5 194 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 TIMM23O14925 209 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 IGFBP3P17936 291 aaPredicted RBP9.46□□□□□ -0.9
SRSF4-204ENST00000489898 ATP6V1E1P36543 226 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 BLCAPP62952 87 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 AESQ08117 197 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 ATXN7L3Q14CW9 347 aaPredicted RBP9.46□□□□□ -0.9
SRSF4-204ENST00000489898 HERPUD1Q15011 391 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 SSX2Q16385 188 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 BEAN1Q3B7T3 259 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 TCTEX1D4Q5JR98 221 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 SAMD5Q5TGI4 173 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 MINOS1Q5TGZ0 78 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 RSBN1Q5VWQ0 802 aaPredicted RBP9.46□□□□□ -0.9
SRSF4-204ENST00000489898 LPCAT4Q643R3 524 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 PXT1Q8NFP0 134 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 MALSU1Q96EH3 234 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 KIRREL1Q96J84 757 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 RDH12Q96NR8 316 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 OCSTAMPQ9BR26 566 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 SMPD3Q9NY59 655 aaPredicted RBP9.46□□□□□ -0.9
SRSF4-204ENST00000489898 TAS2R4Q9NYW5 299 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 CLEC2DQ9UHP7 191 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 GSTK1Q9Y2Q3 226 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 UBE2J1Q9Y385 318 aaPredicted RBP9.46□□□□□ -0.9
SRSF4-204ENST00000489898 MINOS1-NBL1R4GNA1 71 aa9.46□□□□□ -0.9
SRSF4-204ENST00000489898 hADV38S2A0JD32 116 aa9.45□□□□□ -0.9
SRSF4-204ENST00000489898 BTBD17A6NE02 478 aa9.45□□□□□ -0.9
SRSF4-204ENST00000489898 BAG2O95816 211 aa9.45□□□□□ -0.9
SRSF4-204ENST00000489898 GNAO1P09471 354 aa9.45□□□□□ -0.9
SRSF4-204ENST00000489898 ZNF20P17024 532 aa9.45□□□□□ -0.9
SRSF4-204ENST00000489898 GABRR1P24046 479 aa9.45□□□□□ -0.9
SRSF4-204ENST00000489898 OR3A4PP47883 348 aa9.45□□□□□ -0.9
SRSF4-204ENST00000489898 BDH1Q02338 343 aa9.45□□□□□ -0.9
SRSF4-204ENST00000489898 PIGYQ3MUY2 71 aa9.45□□□□□ -0.9
SRSF4-204ENST00000489898 ZNF676Q8N7Q3 588 aa9.45□□□□□ -0.9
SRSF4-204ENST00000489898 C11orf44Q8N8P7 122 aa9.45□□□□□ -0.9
SRSF4-204ENST00000489898 OR4C13Q8NGP0 309 aa9.45□□□□□ -0.9
SRSF4-204ENST00000489898 OR13A1Q8NGR1 328 aa9.45□□□□□ -0.9
SRSF4-204ENST00000489898 OR13D1Q8NGV5 346 aa9.45□□□□□ -0.9
SRSF4-204ENST00000489898 CLEC7AQ9BXN2 247 aa9.45□□□□□ -0.9
SRSF4-204ENST00000489898 EXOSC4Q9NPD3 245 aaKnown RBP9.45□□□□□ -0.9
SRSF4-204ENST00000489898 TRAV8-7A0A075B6U6 113 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 A0A1W2PP11 408 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 A0A1W2PPH5 198 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 A0A1W2PPI3 338 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 NPIPB11E5RHQ5 1161 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 G3V4G9 280 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 OGG1O15527 345 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 MPZL2O60487 215 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 CD28P10747 220 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 CDK2P24941 298 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 DIAPH2-AS1Q14236 149 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 FAM189A2Q15884 450 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 C2orf68Q2NKX9 166 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 HLA-DRB5Q30154 266 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 NHLRC3Q5JS37 347 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 DMKNQ6E0U4 476 aaPredicted RBP9.44□□□□□ -0.9
SRSF4-204ENST00000489898 FAM53AQ6NSI3 398 aaPredicted RBP9.44□□□□□ -0.9
SRSF4-204ENST00000489898 ZBTB49Q6ZSB9 765 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 C1QL4Q86Z23 238 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 OR5AK2Q8NH90 309 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 SMIM19Q96E16 107 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 NPFFR1Q9GZQ6 430 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 IFT22Q9H7X7 185 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 RHOFQ9HBH0 211 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 FKBP14Q9NWM8 211 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 TAS2R3Q9NYW6 316 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 IL36GQ9NZH8 169 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 DIMT1Q9UNQ2 313 aaKnown RBP9.44□□□□□ -0.9
SRSF4-204ENST00000489898 ORC6Q9Y5N6 252 aa9.44□□□□□ -0.9
SRSF4-204ENST00000489898 TRBV5-7A0A0A0MS05 114 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 FAM90A18PA6NE21 464 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 FAM90A16PA6NEW6 464 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 FAM90A20PA6NIJ5 464 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 FAM90A9PA6NNJ1 464 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 FAM90A12PA8MX19 464 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 FAM90A5PA8MXJ8 464 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 CASQ2O14958 399 aaPredicted RBP9.43□□□□□ -0.9
SRSF4-204ENST00000489898 PIN1P1O15428 100 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 FADS2O95864 444 aaKnown RBP9.43□□□□□ -0.9
SRSF4-204ENST00000489898 CYB5AP00167 134 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 SERPINA3P01011 423 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 OPN1MWP04001 364 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 FAM90A15PP0C7V4 464 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 FAM90A13PP0C7W8 464 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 FAM90A14PP0C7W9 464 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 FAM90A24PP0C7X0 464 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 OPN1MW2P0DN77 364 aa9.43□□□□□ -0.9
SRSF4-204ENST00000489898 OPN1MW3P0DN78 364 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms