RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 ANAPC1Q9H1A4 1944 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 COL4A3Q01955 1670 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 CRYM-AS1A6NIL9 109 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 OR5B21A6NL26 309 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 TMEM14DPA8MWL7 114 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 PROB1E7EW31 1015 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 NPIPA7E9PJI5 369 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 IFNL4K9M1U5 179 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 COCHO43405 550 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 NUPR1O60356 82 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 SMPD2O60906 423 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 TRAPPC6AO75865 159 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 TNFSF15O95150 251 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 NPIPA8P0DM63 369 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 IGLC2P0DOY2 106 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 IGLC3P0DOY3 106 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 FAHP16930 419 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 MSR1P21757 451 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 HIST1H1TP22492 207 aaPredicted RBP4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 DUSP1P28562 367 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 RPL15P61313 204 aaKnown RBP4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 RPS4XP62701 263 aaKnown RBP4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 EWSR1Q01844 656 aaKnown RBP eCLIP4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 ROM1Q03395 351 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 ZP2Q05996 745 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 NOGQ13253 232 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 UNC119Q13432 240 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 ARL6IP1Q15041 203 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 VAMP3Q15836 100 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 ADIRFQ15847 76 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 ZIC1Q15915 447 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 SMIM21Q3B7S5 101 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 EMC4Q5J8M3 183 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 LRRC73Q5JTD7 316 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 DCST2Q5T1A1 773 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 KCNIP4Q6PIL6 250 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 UNQ5815/PRO19632Q6UWF5 114 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 Q6ZN92 141 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 CYP2G1PQ6ZSU1 146 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 Q6ZVL8 140 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 HSD11B1LQ7Z5J1 315 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 AMZ2Q86W34 360 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 SPACA3Q8IXA5 215 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 C1orf174Q8IYL3 243 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 SLC22A24Q8N4F4 322 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 LRTM2Q8N967 370 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 ZNF709Q8N972 641 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 OR2I1PQ8NGU4 316 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 OR6N2Q8NGY6 317 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 OTOSQ8NHW6 89 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 VN1R17PQ8TDU5 208 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 FAM216AQ8WUB2 273 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 MBD3L1Q8WWY6 194 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 TMEM234Q8WY98 164 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 OVCA2Q8WZ82 227 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 DYRK2Q92630 601 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 REEP6Q96HR9 211 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 TSSK2Q96PF2 358 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 ADOQ96SZ5 270 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 TXN2Q99757 166 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 MACROD1Q9BQ69 325 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 MTIF3Q9H2K0 278 aaKnown RBP4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 OR51I2Q9H344 312 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 ZNF703Q9H7S9 590 aaPredicted RBP4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 PLEKHF2Q9H8W4 249 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 TUBG2Q9NRH3 451 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 GNG13Q9P2W3 67 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 DUSP13Q9UII6 198 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 RNF24Q9Y225 148 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 TRAPPC1Q9Y5R8 145 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 PXMP4Q9Y6I8 212 aa4.15□□□□□ -1.75
SNRNP40-206ENST00000489853 NUP210LQ5VU65 1888 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 TRIOBPQ9H2D6 2365 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 IGHV1-69-2A0A0G2JMI3 117 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 A0A1W2PRS3 328 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 ZNF320A2RRD8 509 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 C17orf102A2RUQ5 167 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 AQP7P3A6NL99 342 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 VSTM2BA6NLU5 285 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 CORTO00230 105 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 B3GALT2O43825 422 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 HYPMO75409 117 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 TUSC2O75896 110 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 CNOT4O95628 575 aaKnown RBP4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 CDS2O95674 445 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 RENP00797 406 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 TIMP1P01033 207 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 PDGFBP01127 241 aaPredicted RBP4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 IFNA1P01562 189 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 ISG15P05161 165 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 C8AP07357 584 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 DBHP09172 617 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 H2BFMP0C1H6 154 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 ERGP11308 486 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 SCGB1A1P11684 91 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 GNRHRP30968 328 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 EMP2P54851 167 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 TAS2R30P59541 319 aa4.14□□□□□ -1.75
SNRNP40-206ENST00000489853 HYAL1Q12794 435 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms