RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 C12orf4Q9NQ89 552 aa17.52■□□□□ 0.4
SND1-214ENST00000489417 USP9XQ93008 2570 aaPredicted RBP17.52■□□□□ 0.39
SND1-214ENST00000489417 ICE1Q9Y2F5 2266 aa17.52■□□□□ 0.39
SND1-214ENST00000489417 MYO18BQ8IUG5 2567 aa17.51■□□□□ 0.39
SND1-214ENST00000489417 IGKV1D-17A0A075B6S4 117 aa17.51■□□□□ 0.39
SND1-214ENST00000489417 TMEM178BH3BS89 294 aa17.51■□□□□ 0.39
SND1-214ENST00000489417 SSX4O60224 188 aa17.51■□□□□ 0.39
SND1-214ENST00000489417 MT-ND4P03905 459 aa17.51■□□□□ 0.39
SND1-214ENST00000489417 AKAIN1P0CW23 69 aa17.51■□□□□ 0.39
SND1-214ENST00000489417 SHEQ5VZ18 495 aa17.51■□□□□ 0.39
SND1-214ENST00000489417 TEX36Q5VZQ5 186 aa17.51■□□□□ 0.39
SND1-214ENST00000489417 SFRP4Q6FHJ7 346 aaPredicted RBP17.51■□□□□ 0.39
SND1-214ENST00000489417 CD177Q8N6Q3 437 aa17.51■□□□□ 0.39
SND1-214ENST00000489417 CCL17Q92583 94 aa17.51■□□□□ 0.39
SND1-214ENST00000489417 ZNF701Q9NV72 531 aaPredicted RBP17.51■□□□□ 0.39
SND1-214ENST00000489417 ETAA1Q9NY74 926 aa17.51■□□□□ 0.39
SND1-214ENST00000489417 ROS1P08922 2347 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 NAP1L6A6NFF2 107 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 OOEPA6NGQ2 149 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 ZNF736B4DX44 427 aaPredicted RBP17.5■□□□□ 0.39
SND1-214ENST00000489417 TFF1P04155 84 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 CD3DP04234 171 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 FCGR3AP08637 254 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 MUC1P15941 1255 aaPredicted RBP17.5■□□□□ 0.39
SND1-214ENST00000489417 HLA-DMAP28067 261 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 FAUP35544 74 aaKnown RBP17.5■□□□□ 0.39
SND1-214ENST00000489417 MDH2P40926 338 aaKnown RBP17.5■□□□□ 0.39
SND1-214ENST00000489417 COL10A1Q03692 680 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 MICBQ29980 383 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 OR52W1Q6IF63 320 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 STEAP1BQ6NZ63 245 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 NRARPQ7Z6K4 114 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 OR4S1Q8NGB4 309 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 OR4C16Q8NGL9 310 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 NEU4Q8WWR8 484 aaPredicted RBP17.5■□□□□ 0.39
SND1-214ENST00000489417 SNAPC3Q92966 411 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 ST6GALNAC5Q9BVH7 336 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 CHMP1AQ9HD42 196 aaPredicted RBP17.5■□□□□ 0.39
SND1-214ENST00000489417 ZNF230Q9UIE0 474 aaPredicted RBP17.5■□□□□ 0.39
SND1-214ENST00000489417 ZNF222Q9UK12 451 aa17.5■□□□□ 0.39
SND1-214ENST00000489417 RAI1Q7Z5J4 1906 aaPredicted RBP17.5■□□□□ 0.39
SND1-214ENST00000489417 LGALS8O00214 317 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 ZNF205O95201 554 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 CD74P04233 296 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 SPNP16150 400 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 AMY2BP19961 511 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 GABRA2P47869 451 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 HFEQ30201 348 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 ARFGEF3Q5TH69 2177 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 STUMQ69YW2 141 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 BEST4Q8NFU0 473 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 ANGPTL6Q8NI99 470 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 ENKURQ8TC29 256 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 MAFIPQ8WZ33 124 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 PPA2Q9H2U2 334 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 CLEC4MQ9H2X3 399 aaPredicted RBP17.49■□□□□ 0.39
SND1-214ENST00000489417 OCEL1Q9H607 264 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 METRNQ9UJH8 293 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 EDARQ9UNE0 448 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 DYSFO75923 2080 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 CACNA1DQ01668 2161 aa17.49■□□□□ 0.39
SND1-214ENST00000489417 FAM240BA0A1B0GVZ2 78 aa17.48■□□□□ 0.39
SND1-214ENST00000489417 TMEM82A0PJX8 343 aa17.48■□□□□ 0.39
SND1-214ENST00000489417 PSPNO60542 156 aa17.48■□□□□ 0.39
SND1-214ENST00000489417 RAB3DO95716 219 aa17.48■□□□□ 0.39
SND1-214ENST00000489417 NAPSAO96009 420 aa17.48■□□□□ 0.39
SND1-214ENST00000489417 TBPP20226 339 aa17.48■□□□□ 0.39
SND1-214ENST00000489417 BTCP35070 178 aa17.48■□□□□ 0.39
SND1-214ENST00000489417 C20orf204Q6ZNR8 217 aa17.48■□□□□ 0.39
SND1-214ENST00000489417 DEFB108BQ8NET1 73 aa17.48■□□□□ 0.39
SND1-214ENST00000489417 PLPPR1Q8TBJ4 325 aa17.48■□□□□ 0.39
SND1-214ENST00000489417 RIMS4Q9H426 269 aaPredicted RBP17.48■□□□□ 0.39
SND1-214ENST00000489417 TANC2Q9HCD6 1990 aa17.48■□□□□ 0.39
SND1-214ENST00000489417 PPIAL4EA0A075B759 164 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 TRAV38-1A0A0B4J264 116 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 PPIAL4DF5H284 164 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 M0QYG6 137 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 PPIAL4FP0DN26 164 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 KCNJ3P48549 501 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 ACTBL2Q562R1 376 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 FAAP20Q6NZ36 180 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 ASCC1Q8N9N2 400 aaKnown RBP17.47■□□□□ 0.39
SND1-214ENST00000489417 OR4D10Q8NGI6 311 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 OR4K15Q8NH41 348 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 PLEKHF2Q9H8W4 249 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 TMEM165Q9HC07 324 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 MCUBQ9NWR8 336 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 PPIAL4AQ9Y536 164 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 PKDREJQ9NTG1 2253 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 COL8A2P25067 703 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 SLC6A1P30531 599 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 OR3A1P47881 315 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 MEF2DQ14814 521 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 ATXN7L3Q14CW9 347 aaPredicted RBP17.47■□□□□ 0.39
SND1-214ENST00000489417 RNASE10Q5GAN6 216 aaKnown RBP17.47■□□□□ 0.39
SND1-214ENST00000489417 CCBE1Q6UXH8 406 aaPredicted RBP17.47■□□□□ 0.39
SND1-214ENST00000489417 Q6ZPA2 131 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 C17orf107Q6ZR85 190 aa17.47■□□□□ 0.39
SND1-214ENST00000489417 MRPL30Q8TCC3 161 aaKnown RBP17.47■□□□□ 0.39
SND1-214ENST00000489417 SDSLQ96GA7 329 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms