RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 C11orf1Q9H5F2 150 aa16.91■□□□□ 0.3
HMG20B-213ENST00000488973 PLEK2Q9NYT0 353 aa16.91■□□□□ 0.3
HMG20B-213ENST00000488973 CEP192Q8TEP8 1941 aa16.91■□□□□ 0.3
HMG20B-213ENST00000488973 MED19A0JLT2 244 aaPredicted RBP16.91■□□□□ 0.3
HMG20B-213ENST00000488973 CNN3Q15417 329 aaKnown RBP16.91■□□□□ 0.3
HMG20B-213ENST00000488973 CPEB2Q7Z5Q1 589 aaKnown RBP16.91■□□□□ 0.3
HMG20B-213ENST00000488973 OR2C3Q8N628 320 aa16.91■□□□□ 0.3
HMG20B-213ENST00000488973 ZNF286AQ9HBT8 521 aa16.91■□□□□ 0.3
HMG20B-213ENST00000488973 ZNF581Q9P0T4 197 aa16.91■□□□□ 0.3
HMG20B-213ENST00000488973 PHF1O43189 567 aaPredicted RBP16.9■□□□□ 0.3
HMG20B-213ENST00000488973 DHHO43323 396 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 CDS2O95674 445 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 ZNF25P17030 456 aaPredicted RBP16.9■□□□□ 0.3
HMG20B-213ENST00000488973 KIAA0141Q14154 515 aaPredicted RBP16.9■□□□□ 0.3
HMG20B-213ENST00000488973 FBXL14Q8N1E6 418 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 SLC35G3Q8N808 338 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 SPACA9Q96E40 222 aaPredicted RBP16.9■□□□□ 0.3
HMG20B-213ENST00000488973 SHANK1Q9Y566 2161 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 KIAA1549Q9HCM3 1950 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 IGKV1-27A0A075B6S5 117 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 A0A1B0GV50 99 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 FAM230AA0A1W2PPH8 454 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 RPL36A-HNRNPH2H7BZ11 118 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 DKK1O94907 266 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 GLI4P10075 376 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 PNLIPP16233 465 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 RPS10P46783 165 aaKnown RBP16.9■□□□□ 0.3
HMG20B-213ENST00000488973 GPR137CQ8N3F9 429 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 OR10AD1Q8NGE0 317 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 OR11L1Q8NGX0 322 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 OR2G3Q8NGZ4 309 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 OR14L1PQ8NHC6 308 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 MR1Q95460 341 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 RBM24Q9BX46 236 aaKnown RBP16.9■□□□□ 0.3
HMG20B-213ENST00000488973 GAB2Q9UQC2 676 aa16.9■□□□□ 0.3
HMG20B-213ENST00000488973 A0A087WWC5 75 aa16.89■□□□□ 0.29
HMG20B-213ENST00000488973 PITX3O75364 302 aa16.89■□□□□ 0.29
HMG20B-213ENST00000488973 RAC2P15153 192 aa16.89■□□□□ 0.29
HMG20B-213ENST00000488973 SRPXP78539 464 aa16.89■□□□□ 0.29
HMG20B-213ENST00000488973 SPSB3Q6PJ21 355 aa16.89■□□□□ 0.29
HMG20B-213ENST00000488973 KIAA1456Q9P272 454 aa16.89■□□□□ 0.29
HMG20B-213ENST00000488973 VAMP5O95183 116 aa16.89■□□□□ 0.29
HMG20B-213ENST00000488973 ATP6V0CP27449 155 aa16.89■□□□□ 0.29
HMG20B-213ENST00000488973 LHFPL2Q6ZUX7 228 aa16.89■□□□□ 0.29
HMG20B-213ENST00000488973 TMEM123Q8N131 208 aa16.89■□□□□ 0.29
HMG20B-213ENST00000488973 RASL10BQ96S79 203 aa16.89■□□□□ 0.29
HMG20B-213ENST00000488973 MRPS17Q9Y2R5 130 aaKnown RBP16.89■□□□□ 0.29
HMG20B-213ENST00000488973 H3BQ15 152 aa16.88■□□□□ 0.29
HMG20B-213ENST00000488973 GEMIN2O14893 280 aaKnown RBP16.88■□□□□ 0.29
HMG20B-213ENST00000488973 CCL20P78556 96 aa16.88■□□□□ 0.29
HMG20B-213ENST00000488973 RSPO4Q2I0M5 234 aaPredicted RBP16.88■□□□□ 0.29
HMG20B-213ENST00000488973 C20orf196Q8IYI0 205 aa16.88■□□□□ 0.29
HMG20B-213ENST00000488973 CADM4Q8NFZ8 388 aa16.88■□□□□ 0.29
HMG20B-213ENST00000488973 DYRK2Q92630 601 aa16.88■□□□□ 0.29
HMG20B-213ENST00000488973 ZNF385AQ96PM9 386 aaKnown RBP16.88■□□□□ 0.29
HMG20B-213ENST00000488973 TCFL5Q9UL49 500 aa16.88■□□□□ 0.29
HMG20B-213ENST00000488973 CHTOPQ9Y3Y2 248 aaKnown RBP16.88■□□□□ 0.29
HMG20B-213ENST00000488973 FAM24AA6NFZ4 105 aa16.88■□□□□ 0.29
HMG20B-213ENST00000488973 TMEM210A6NLX4 147 aa16.88■□□□□ 0.29
HMG20B-213ENST00000488973 CRYGSP22914 178 aa16.88■□□□□ 0.29
HMG20B-213ENST00000488973 HERV-K104P61576 105 aa16.88■□□□□ 0.29
HMG20B-213ENST00000488973 OR8B8Q15620 311 aa16.88■□□□□ 0.29
HMG20B-213ENST00000488973 OSR2Q8N2R0 312 aa16.88■□□□□ 0.29
HMG20B-213ENST00000488973 RAB39BQ96DA2 213 aa16.88■□□□□ 0.29
HMG20B-213ENST00000488973 BORCS8Q96FH0 119 aa16.88■□□□□ 0.29
HMG20B-213ENST00000488973 TP53RKQ96S44 253 aa16.88■□□□□ 0.29
HMG20B-213ENST00000488973 A0A087WZY1 265 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 NPIPA2E9PIF3 369 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 NPIPA3F8WFD2 350 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 HSPA12AO43301 675 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 SRP19P09132 144 aaKnown RBP16.87■□□□□ 0.29
HMG20B-213ENST00000488973 MYF5P13349 255 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 ASCL1P50553 236 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 FAM27BQ5VT28 67 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 FAM185AQ8N0U4 392 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 OR2AE1Q8NHA4 323 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 HLA-CQ95604 372 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 ATG101Q9BSB4 218 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 PLEKHF2Q9H8W4 249 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 IL36GQ9NZH8 169 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 ASCC3Q8N3C0 2202 aaKnown RBP16.87■□□□□ 0.29
HMG20B-213ENST00000488973 C3orf85A0A1B0GTC6 90 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 TRDCB7Z8K6 153 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 SNRPCP09234 159 aaKnown RBP16.87■□□□□ 0.29
HMG20B-213ENST00000488973 AADACP22760 399 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 RND3P61587 244 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 PIGYQ3MUY2 71 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 SP5Q6BEB4 398 aaPredicted RBP16.87■□□□□ 0.29
HMG20B-213ENST00000488973 MEX3BQ6ZN04 569 aaKnown RBP16.87■□□□□ 0.29
HMG20B-213ENST00000488973 SLC25A31Q9H0C2 315 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 SMOC1Q9H4F8 434 aa16.87■□□□□ 0.29
HMG20B-213ENST00000488973 FOXD3Q9UJU5 478 aaPredicted RBP16.87■□□□□ 0.29
HMG20B-213ENST00000488973 PTRH2Q9Y3E5 179 aaKnown RBP16.87■□□□□ 0.29
HMG20B-213ENST00000488973 ELOA3CA0A087WX78 387 aaPredicted RBP16.86■□□□□ 0.29
HMG20B-213ENST00000488973 IGSF23A1L1A6 192 aa16.86■□□□□ 0.29
HMG20B-213ENST00000488973 FAM221AA4D161 298 aa16.86■□□□□ 0.29
HMG20B-213ENST00000488973 NKX2-6A6NCS4 301 aa16.86■□□□□ 0.29
HMG20B-213ENST00000488973 HSD17B6O14756 317 aa16.86■□□□□ 0.29
HMG20B-213ENST00000488973 MPPED1O15442 326 aa16.86■□□□□ 0.29
HMG20B-213ENST00000488973 TIAF1O95411 115 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms