RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 UNQ9370/PRO34162Q6UXP9 181 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 ZNF782Q6ZMW2 699 aaPredicted RBP12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 LYPD6Q86Y78 171 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 CHST4Q8NCG5 386 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 BEND2Q8NDZ0 799 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 OR10K1Q8NGX5 313 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 PPP1R35Q8TAP8 253 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 COQ2Q96H96 371 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 ZNF714Q96N38 554 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 PPA2Q9H2U2 334 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 VCX3BQ9H321 246 aa12.97□□□□□ -0.33
CTDSP1-209ENST00000488627 TRAV24A0A0B4J272 114 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 FAM90A8PA6NJQ4 464 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 MMP23AO75900 390 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 ATP6V1G2O95670 118 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 IGHV1-8P0DP01 117 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 ZNF44P15621 663 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 COX7A1P24310 79 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 CRHBPP24387 322 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 GLIPR1P48060 266 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 GP2P55259 537 aaKnown RBP12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 AESQ08117 197 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 INSL4Q14641 139 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 LDLRAD2Q5SZI1 272 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 OR11H6Q8NGC7 330 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 CORO2AQ92828 525 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 ZNF184Q99676 751 aaPredicted RBP12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 MND1Q9BWT6 205 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 MEGF9Q9H1U4 602 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 DPAGT1Q9H3H5 408 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 IL36GQ9NZH8 169 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 C1RLQ9NZP8 487 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 ZNF581Q9P0T4 197 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 FOXJ3Q9UPW0 622 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 TPRKBQ9Y3C4 175 aa12.96□□□□□ -0.33
CTDSP1-209ENST00000488627 ODF3BA8MYP8 253 aa12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 GPR137BO60478 399 aa12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 OMGP23515 440 aa12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 PAX6P26367 422 aa12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 HSPA13P48723 471 aa12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 IL13RA2Q14627 380 aa12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 RSU1Q15404 277 aa12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 PIGYQ3MUY2 71 aa12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 NHLRC3Q5JS37 347 aa12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 C3orf56Q8N813 242 aa12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 DYRK2Q92630 601 aa12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 NR1H4Q96RI1 486 aaPredicted RBP12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 FAM192AQ9GZU8 254 aa12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 CKLFQ9UBR5 152 aa12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 ING4Q9UNL4 249 aa12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 UBE2J1Q9Y385 318 aaPredicted RBP12.95□□□□□ -0.34
CTDSP1-209ENST00000488627 ODAMA1E959 279 aa12.94□□□□□ -0.34
CTDSP1-209ENST00000488627 HTR3BO95264 441 aa12.94□□□□□ -0.34
CTDSP1-209ENST00000488627 PAHP00439 452 aa12.94□□□□□ -0.34
CTDSP1-209ENST00000488627 RPL15P61313 204 aaKnown RBP12.94□□□□□ -0.34
CTDSP1-209ENST00000488627 GPR50Q13585 617 aa12.94□□□□□ -0.34
CTDSP1-209ENST00000488627 ZNF626Q68DY1 528 aa12.94□□□□□ -0.34
CTDSP1-209ENST00000488627 LHFPL4Q7Z7J7 247 aa12.94□□□□□ -0.34
CTDSP1-209ENST00000488627 CDH26Q8IXH8 852 aa12.94□□□□□ -0.34
CTDSP1-209ENST00000488627 DYNAPQ8N1N2 210 aa12.94□□□□□ -0.34
CTDSP1-209ENST00000488627 ZNF747Q9BV97 191 aa12.94□□□□□ -0.34
CTDSP1-209ENST00000488627 METTL9Q9H1A3 318 aa12.94□□□□□ -0.34
CTDSP1-209ENST00000488627 IFT22Q9H7X7 185 aa12.94□□□□□ -0.34
CTDSP1-209ENST00000488627 MMP24Q9Y5R2 645 aa12.94□□□□□ -0.34
CTDSP1-209ENST00000488627 A0A1W2PP11 408 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 FUOMA2VDF0 154 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 SC5DO75845 299 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 NDUFA7O95182 113 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 CGB3P0DN86 165 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 CGB7P0DN87 165 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 MDKP21741 143 aaPredicted RBP12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 ACSM3Q53FZ2 586 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 KRBOX4Q5JUW0 171 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 FAM27D1Q5T7N8 215 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 BAIAP2L2Q6UXY1 529 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 OSR2Q8N2R0 312 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 MS4A15Q8N5U1 240 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 OR13D1Q8NGV5 346 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 PIFOQ8TCI5 191 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 PPIL3Q9H2H8 161 aaKnown RBP12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 NCOR1P1Q9H4R4 102 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 TAS2R3Q9NYW6 316 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 VPREB3Q9UKI3 123 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 RAB26Q9ULW5 256 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 ST3GAL6Q9Y274 331 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 SESN1Q9Y6P5 492 aa12.93□□□□□ -0.34
CTDSP1-209ENST00000488627 TRGV10A0A0A0MS01 117 aa12.92□□□□□ -0.34
CTDSP1-209ENST00000488627 POM121CA8CG34 1229 aa12.92□□□□□ -0.34
CTDSP1-209ENST00000488627 HSPB6O14558 160 aa12.92□□□□□ -0.34
CTDSP1-209ENST00000488627 RGS10O43665 173 aa12.92□□□□□ -0.34
CTDSP1-209ENST00000488627 CLPXO76031 633 aa12.92□□□□□ -0.34
CTDSP1-209ENST00000488627 MAS1P04201 325 aa12.92□□□□□ -0.34
CTDSP1-209ENST00000488627 CRYBA1P05813 215 aa12.92□□□□□ -0.34
CTDSP1-209ENST00000488627 GDNFP39905 211 aa12.92□□□□□ -0.34
CTDSP1-209ENST00000488627 RBM11P57052 281 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-209ENST00000488627 PAX5Q02548 391 aa12.92□□□□□ -0.34
CTDSP1-209ENST00000488627 TPBGQ13641 420 aa12.92□□□□□ -0.34
CTDSP1-209ENST00000488627 ATXN7L3Q14CW9 347 aaPredicted RBP12.92□□□□□ -0.34
CTDSP1-209ENST00000488627 MED22Q15528 200 aa12.92□□□□□ -0.34
CTDSP1-209ENST00000488627 AANATQ16613 207 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms