RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 PSPNO60542 156 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 ZNF737O75373 536 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 FCN3O75636 299 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 CD37P11049 281 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 LMO1P25800 156 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 CLDN12P56749 244 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 OR10A3P58181 314 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 ARF6P62330 175 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 PAX8Q06710 450 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 CHRFAM7AQ494W8 412 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 C17orf107Q6ZR85 190 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 TMEM104Q8NE00 496 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 OR4S1Q8NGB4 309 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 OR51D1Q8NGF3 324 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 NEK7Q8TDX7 302 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 FAM3DQ96BQ1 224 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 URM1Q9BTM9 101 aaKnown RBP13.01□□□□□ -0.33
C9orf3-219ENST00000488186 TMEM59Q9BXS4 323 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 TMPRSS13Q9BYE2 586 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 BARHL1Q9BZE3 327 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 PPA2Q9H2U2 334 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 RNF167Q9H6Y7 350 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 SPACA1Q9HBV2 294 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 ING3Q9NXR8 418 aa13.01□□□□□ -0.33
C9orf3-219ENST00000488186 JMJD1CQ15652 2540 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 ARHGAP32A7KAX9 2087 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 SHISA3A0PJX4 238 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 IFITM5A6NNB3 132 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 NOTOA8MTQ0 251 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 SLC33A1O00400 549 aaPredicted RBP13□□□□□ -0.33
C9orf3-219ENST00000488186 CRLF1O75462 422 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 TOX4O94842 621 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 VSIG8P0DPA2 414 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 PAX2Q02962 417 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 C2orf76Q3KRA6 126 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 OR10K2Q6IF99 312 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 IL17RELQ6ZVW7 336 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 OR2W3Q7Z3T1 314 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 LY6G5BQ8NDX9 201 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 C8orf46Q8TAG6 207 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 NANPQ8TBE9 248 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 SLC25A28Q96A46 364 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 DMRTB1Q96MA1 342 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 PCGF1Q9BSM1 259 aa13□□□□□ -0.33
C9orf3-219ENST00000488186 hCG_1809904A0A1W2PP81 198 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 A0A1W2PPE2 198 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 A0A1W2PR64 198 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 A0A1W2PRV1 198 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 hADV38S2A0JD32 116 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 FAM90A10PA6NDY2 464 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 FAM90A18PA6NE21 464 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 FAM90A16PA6NEW6 464 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 FAM90A20PA6NIJ5 464 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 FAM90A8PA6NJQ4 464 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 FAM90A7PA6NKC0 464 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 FAM90A22PA8MWA6 464 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 FAM90A12PA8MX19 464 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 FAM90A5PA8MXJ8 464 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 FAM90A23PA8MXZ1 464 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 MCRIP1C9JLW8 97 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 AIPO00170 330 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 TFAP2AP05549 437 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 FAM90A15PP0C7V4 464 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 FAM90A13PP0C7W8 464 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 FAM90A14PP0C7W9 464 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 FAM90A24PP0C7X0 464 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 HOXB4P17483 251 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-219ENST00000488186 RPL5P46777 297 aaKnown RBP12.99□□□□□ -0.33
C9orf3-219ENST00000488186 OR3A1P47881 315 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 RBM39Q14498 530 aaKnown RBP12.99□□□□□ -0.33
C9orf3-219ENST00000488186 ATXN7L3Q14CW9 347 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-219ENST00000488186 KRTAP21-3Q3LHN1 58 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 KRBOX4Q5JUW0 171 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 GPR107Q5VW38 600 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 TRAPPC6BQ86SZ2 158 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 BPIFB2Q8N4F0 458 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 SUMF2Q8NBJ7 301 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 C1orf147Q96MC9 270 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-219ENST00000488186 NEDD4LQ96PU5 975 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 DPCDQ9BVM2 203 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-219ENST00000488186 C19orf12Q9NSK7 152 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 DAPK2Q9UIK4 370 aa12.99□□□□□ -0.33
C9orf3-219ENST00000488186 TRAV24A0A0B4J272 114 aa12.98□□□□□ -0.33
C9orf3-219ENST00000488186 CLEC2LP0C7M8 214 aa12.98□□□□□ -0.33
C9orf3-219ENST00000488186 SRD5A1P18405 259 aa12.98□□□□□ -0.33
C9orf3-219ENST00000488186 FUT3P21217 361 aa12.98□□□□□ -0.33
C9orf3-219ENST00000488186 ERP29P30040 261 aaKnown RBP12.98□□□□□ -0.33
C9orf3-219ENST00000488186 ALDH3B2P48448 385 aa12.98□□□□□ -0.33
C9orf3-219ENST00000488186 KCNJ3P48549 501 aa12.98□□□□□ -0.33
C9orf3-219ENST00000488186 RPS27AP62979 156 aaKnown RBP12.98□□□□□ -0.33
C9orf3-219ENST00000488186 MEF2CQ06413 473 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-219ENST00000488186 AESQ08117 197 aa12.98□□□□□ -0.33
C9orf3-219ENST00000488186 FAM189A2Q15884 450 aa12.98□□□□□ -0.33
C9orf3-219ENST00000488186 TMEM200BQ69YZ2 307 aa12.98□□□□□ -0.33
C9orf3-219ENST00000488186 METAP1DQ6UB28 335 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-219ENST00000488186 TPRX1Q8N7U7 411 aa12.98□□□□□ -0.33
C9orf3-219ENST00000488186 POM121Q96HA1 1249 aa12.98□□□□□ -0.33
C9orf3-219ENST00000488186 Q96M66 194 aa12.98□□□□□ -0.33
C9orf3-219ENST00000488186 WDFY2Q96P53 400 aa12.98□□□□□ -0.33
C9orf3-219ENST00000488186 KCNK15Q9H427 330 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms