RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 ING3Q9NXR8 418 aa9.75□□□□□ -0.85
VPS16-208ENST00000487461 TAS2R3Q9NYW6 316 aa9.75□□□□□ -0.85
VPS16-208ENST00000487461 EXOGQ9Y2C4 368 aaKnown RBP9.75□□□□□ -0.85
VPS16-208ENST00000487461 ODAMA1E959 279 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 FUOMA2VDF0 154 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 LEUTXA8MZ59 168 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 LY6LH3BQJ8 138 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 SLC33A1O00400 549 aaPredicted RBP9.74□□□□□ -0.85
VPS16-208ENST00000487461 DEGS1O15121 323 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 PIN1P1O15428 100 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 AMY1AP04745 511 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 AMY2AP04746 511 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 OCM2P0CE71 109 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 OCMP0CE72 109 aaPredicted RBP9.74□□□□□ -0.85
VPS16-208ENST00000487461 ZNF44P15621 663 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 CD34P28906 385 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 BRS3P32247 399 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 LOXL3P58215 753 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 ALKBH1Q13686 389 aaKnown RBP9.74□□□□□ -0.85
VPS16-208ENST00000487461 CDK5R1Q15078 307 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 C17orf58Q2M2W7 97 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 MEDAGQ5VYS4 303 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 C16orf82Q7Z2V1 217 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 CENPVQ7Z7K6 275 aaPredicted RBP9.74□□□□□ -0.85
VPS16-208ENST00000487461 LHFPL3Q86UP9 236 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 SAXO1Q8IYX7 474 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 ZNF596Q8TC21 504 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 PHF21AQ96BD5 680 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 LGALS12Q96DT0 336 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 C4orf36Q96KX1 117 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 GAL3ST2Q9H3Q3 398 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 ZCCHC4Q9H5U6 513 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 ISG20L2Q9H9L3 353 aaKnown RBP9.74□□□□□ -0.85
VPS16-208ENST00000487461 LIN7BQ9HAP6 207 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 RHOFQ9HBH0 211 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 AURKAIP1Q9NWT8 199 aaPredicted RBP9.74□□□□□ -0.85
VPS16-208ENST00000487461 MYRFQ9Y2G1 1151 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 ZNF281Q9Y2X9 895 aa9.74□□□□□ -0.85
VPS16-208ENST00000487461 TCRBV4S1A1TA0A5B7 111 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 SH2D7A6NKC9 451 aaPredicted RBP9.73□□□□□ -0.85
VPS16-208ENST00000487461 BUB1B-PAK6H3BSN5 160 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 EI24O14681 340 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 CIB2O75838 187 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 OR2F2O95006 317 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 CSN2P05814 226 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 LPLP06858 475 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 CGB3P0DN86 165 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 CGB7P0DN87 165 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 TMEM225BP0DP42 221 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 IGLL1P15814 213 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 ZP1P60852 638 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 ABCA11PQ4W5N1 156 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 KRBOX4Q5JUW0 171 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 TPTE2P1Q5T6R2 138 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 FOXB2Q5VYV0 432 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 C10orf99Q6UWK7 81 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 RBM14Q96PK6 669 aaKnown RBP9.73□□□□□ -0.85
VPS16-208ENST00000487461 ZNF649Q9BS31 505 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 SLC25A33Q9BSK2 321 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 NEK6Q9HC98 313 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 PCDHGB5Q9Y5G0 923 aa9.73□□□□□ -0.85
VPS16-208ENST00000487461 A0A087X0M5 115 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 A0A1B0GX30 115 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 E9PI62 339 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 H3BNX3 289 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 TOR1AO14656 332 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 ALX3O95076 343 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 GABRB1P18505 474 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 CD33P20138 364 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 PTGFRP43088 359 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 OR3A4PP47883 348 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 PRRX1P54821 245 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 GALEQ14376 348 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 KISS1Q15726 138 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 HLA-DRB5Q30154 266 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 CHST4Q8NCG5 386 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 OR4D6Q8NGJ1 314 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 OR5D14Q8NGL3 314 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 CAPSLQ8WWF8 208 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 MYDGFQ969H8 173 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 AKR1E2Q96JD6 320 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 ALG8Q9BVK2 526 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 PPIL3Q9H2H8 161 aaKnown RBP9.72□□□□□ -0.85
VPS16-208ENST00000487461 ORC6Q9Y5N6 252 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 TSSC4Q9Y5U2 329 aaPredicted RBP9.72□□□□□ -0.85
VPS16-208ENST00000487461 DNAH3Q8TD57 4116 aa9.72□□□□□ -0.85
VPS16-208ENST00000487461 KBTBD11-OT1A0A1B0GTJ5 212 aa9.71□□□□□ -0.86
VPS16-208ENST00000487461 ZNF729A6NN14 1252 aaPredicted RBP9.71□□□□□ -0.86
VPS16-208ENST00000487461 SULT1B1O43704 296 aa9.71□□□□□ -0.86
VPS16-208ENST00000487461 ZFPL1O95159 310 aa9.71□□□□□ -0.86
VPS16-208ENST00000487461 HCKP08631 526 aa9.71□□□□□ -0.86
VPS16-208ENST00000487461 NFYBP25208 207 aa9.71□□□□□ -0.86
VPS16-208ENST00000487461 CEACAM3P40198 252 aa9.71□□□□□ -0.86
VPS16-208ENST00000487461 ALDH3A2P51648 485 aa9.71□□□□□ -0.86
VPS16-208ENST00000487461 ATXN7L3Q14CW9 347 aaPredicted RBP9.71□□□□□ -0.86
VPS16-208ENST00000487461 ZNF691Q5VV52 312 aa9.71□□□□□ -0.86
VPS16-208ENST00000487461 SERPINA12Q8IW75 414 aa9.71□□□□□ -0.86
VPS16-208ENST00000487461 CBR4Q8N4T8 237 aa9.71□□□□□ -0.86
VPS16-208ENST00000487461 PARP16Q8N5Y8 322 aa9.71□□□□□ -0.86
VPS16-208ENST00000487461 RHOXF1Q8NHV9 184 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms