RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 KIR3DL2P43630 455 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 GPR4P46093 362 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 FABP6P51161 128 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 ATP6V0D1P61421 351 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 RPS24P62847 133 aaKnown RBP3□□□□□ -1.93
PRPF38A-203ENST00000487160 C16orf72Q14CZ0 275 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 TSC22D1Q15714 1073 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 DEFB109BQ30KR1 87 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 Q3ZCU0 254 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 ULK3Q6PHR2 472 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 WDR86Q86TI4 376 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 FAM58AQ8N1B3 248 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 ASCC1Q8N9N2 400 aaKnown RBP3□□□□□ -1.93
PRPF38A-203ENST00000487160 FBXO36Q8NEA4 188 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 OR13C9Q8NGT0 318 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 OR2L8Q8NGY9 312 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 SYNPRQ8TBG9 265 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 OR8D1Q8WZ84 308 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 PTX4Q96A99 478 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 TMEM159Q96B96 161 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 FLYWCH2Q96CP2 140 aaKnown RBP3□□□□□ -1.93
PRPF38A-203ENST00000487160 NEURL3Q96EH8 262 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 NAA50Q9GZZ1 169 aaKnown RBP3□□□□□ -1.93
PRPF38A-203ENST00000487160 GAL3ST2Q9H3Q3 398 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 TMEM27Q9HBJ8 222 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 STK38LQ9Y2H1 464 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 HYOU1Q9Y4L1 999 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 BZW2Q9Y6E2 419 aaKnown RBP3□□□□□ -1.93
PRPF38A-203ENST00000487160 TMEM14AQ9Y6G1 99 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 NUP210LQ5VU65 1888 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 RP1L1Q8IWN7 2480 aaPredicted RBP2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 DIDO1Q9BTC0 2240 aaKnown RBP2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 TMEM223A0PJW6 202 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 SLC22A20A6NK97 555 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 ZNF879B4DU55 563 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 MKRN2OSH3BPM6 223 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 KPNA3O00505 521 aaPredicted RBP2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 FARS2O95363 451 aaKnown RBP2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 IGLV3-27P01718 113 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 APCSP02743 223 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 OR56A5P0C7T3 313 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 CCL4P13236 92 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 PFN2P35080 140 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 NDUFA8P51970 172 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 CACNG7P62955 275 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 CYP24A1Q07973 514 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 EIF4EBP2Q13542 120 aaPredicted RBP2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 ZNF684Q5T5D7 378 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 FBXW9Q5XUX1 488 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 SAXO2Q658L1 398 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 FAM71E1Q6IPT2 247 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 SPOPLQ6IQ16 392 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 SNX20Q7Z614 316 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 UNC93AQ86WB7 457 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 CDKL3Q8IVW4 592 aaPredicted RBP2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 ARHGAP18Q8N392 663 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 TRAM1L1Q8N609 369 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 OR4K5Q8NGD3 323 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 OR10W1Q8NGF6 305 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 PIH1D2Q8WWB5 315 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 CIDECQ96AQ7 238 aaPredicted RBP2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 SGTBQ96EQ0 304 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 BTN2A3PQ96KV6 586 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 GPR21Q99679 349 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 ULBP1Q9BZM6 244 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 OR52D1Q9H346 318 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 RDH14Q9HBH5 336 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 DYRK4Q9NR20 520 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 PRO0461Q9UI25 63 aa2.99□□□□□ -1.93
PRPF38A-203ENST00000487160 NAV3Q8IVL0 2385 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 NUP214P35658 2090 aaPredicted RBP2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 IGHV1-69DA0A0B4J2H0 117 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 PDZK1P1A8MUH7 402 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 ZNF705GA8MUZ8 300 aaPredicted RBP2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 ANKRD65E5RJM6 399 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 PSMD11O00231 422 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 POLR1CO15160 346 aaPredicted RBP2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 RAD1O60671 282 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 HSBP1O75506 76 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 REM1O75628 298 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 KLK1P06870 262 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 MRPL3P09001 348 aaKnown RBP2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 OR8U9P0C7N5 309 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 CCDC172P0C7W6 258 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 CD37P11049 281 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 CCL2P13500 99 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 RAB5AP20339 215 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 PSMD4P55036 377 aaKnown RBP2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 LINC00315P59091 139 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 TAS2R46P59540 309 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 RPL23P62829 140 aaKnown RBP2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 INCA1Q0VD86 236 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 ADIGQ0VDE8 80 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 Q5W150 140 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 DEGS2Q6QHC5 323 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 WDR82Q6UXN9 313 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 WDFY1Q8IWB7 410 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 LGI3Q8N145 548 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 KIF2BQ8N4N8 673 aa2.98□□□□□ -1.93
PRPF38A-203ENST00000487160 OR6N1Q8NGY5 312 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms