RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-211	ENST00000485967	KCNG3	Q8TAE7	436 aa		11.44	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM46B	Q96A09	425 aa		11.44	□□□□□ -0.58
SCAP-211	ENST00000485967	FUNDC2	Q9BWH2	189 aa		11.44	□□□□□ -0.58
SCAP-211	ENST00000485967	BEX2	Q9BXY8	128 aa		11.44	□□□□□ -0.58
SCAP-211	ENST00000485967	RNF167	Q9H6Y7	350 aa		11.44	□□□□□ -0.58
SCAP-211	ENST00000485967	TMEM160	Q9NX00	188 aa		11.44	□□□□□ -0.58
SCAP-211	ENST00000485967	ONECUT1	Q9UBC0	465 aa		11.44	□□□□□ -0.58
SCAP-211	ENST00000485967	STEAP1	Q9UHE8	339 aa		11.44	□□□□□ -0.58
SCAP-211	ENST00000485967	SCOC	Q9UIL1	159 aa		11.44	□□□□□ -0.58
SCAP-211	ENST00000485967	AUP1	Q9Y679	476 aa		11.44	□□□□□ -0.58
SCAP-211	ENST00000485967	WNK2	Q9Y3S1	2297 aa		11.44	□□□□□ -0.58
SCAP-211	ENST00000485967	TRBV23-1	A0A0A0MS06	115 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967		A0A1W2PPH5	198 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	FUOM	A2VDF0	154 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	SMIM30	A4D0T7	59 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	IFITM5	A6NNB3	132 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	SLC33A1	O00400	549 aa	Predicted RBP	11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	HSPB6	O14558	160 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	MGST3	O14880	152 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	GEMIN2	O14893	280 aa	Known RBP	11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	PSPN	O60542	156 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	ZNF737	O75373	536 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	VSIG8	P0DPA2	414 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	SRP14	P37108	136 aa	Known RBP	11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	CLDN12	P56749	244 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	RPL31	P62899	125 aa	Known RBP	11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	PAX2	Q02962	417 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	PAX8	Q06710	450 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	MPV17L	Q2QL34	196 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	PAN3	Q58A45	887 aa	Known RBP	11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	OR10K2	Q6IF99	312 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	C17orf107	Q6ZR85	190 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	CMTM4	Q8IZR5	234 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	TMEM104	Q8NE00	496 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	OR4S1	Q8NGB4	309 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	OR51D1	Q8NGF3	324 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	SLC25A28	Q96A46	364 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM3D	Q96BQ1	224 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	C1orf147	Q96MC9	270 aa	Predicted RBP	11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	PPA2	Q9H2U2	334 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	ING3	Q9NXR8	418 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	LPAR3	Q9UBY5	353 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	CDC42EP3	Q9UKI2	254 aa		11.43	□□□□□ -0.58
SCAP-211	ENST00000485967	NOTO	A8MTQ0	251 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967		H3BUI4	141 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	TFAP2A	P05549	437 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	OR3A1	P47881	315 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	ALDH3B2	P48448	385 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	ARF6	P62330	175 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	BLMH	Q13867	455 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	C2orf76	Q3KRA6	126 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	METTL11B	Q5VVY1	283 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	GPR107	Q5VW38	600 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	IL17REL	Q6ZVW7	336 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	LY6G5B	Q8NDX9	201 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	NEK7	Q8TDX7	302 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	DMRTB1	Q96MA1	342 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	URM1	Q9BTM9	101 aa	Known RBP	11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	TMEM59	Q9BXS4	323 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	TMPRSS13	Q9BYE2	586 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	SPACA1	Q9HBV2	294 aa		11.42	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM90A10P	A6NDY2	464 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM90A18P	A6NE21	464 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM90A16P	A6NEW6	464 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM90A20P	A6NIJ5	464 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM90A8P	A6NJQ4	464 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM90A7P	A6NKC0	464 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM90A22P	A8MWA6	464 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM90A12P	A8MX19	464 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM90A5P	A8MXJ8	464 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM90A23P	A8MXZ1	464 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	MCRIP1	C9JLW8	97 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	AIP	O00170	330 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	TOX4	O94842	621 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	CLEC2L	P0C7M8	214 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM90A15P	P0C7V4	464 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM90A13P	P0C7W8	464 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM90A14P	P0C7W9	464 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	FAM90A24P	P0C7X0	464 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	RPL5	P46777	297 aa	Known RBP	11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	AES	Q08117	197 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	CHRFAM7A	Q494W8	412 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	METAP1D	Q6UB28	335 aa	Predicted RBP	11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	OR2W3	Q7Z3T1	314 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	BPIFB2	Q8N4F0	458 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	SUMF2	Q8NBJ7	301 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	C8orf46	Q8TAG6	207 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	NANP	Q8TBE9	248 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967		Q96M66	194 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	NEDD4L	Q96PU5	975 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	PCGF1	Q9BSM1	259 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	DPCD	Q9BVM2	203 aa	Predicted RBP	11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	BARHL1	Q9BZE3	327 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	KCNK15	Q9H427	330 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	IFT22	Q9H7X7	185 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	C19orf12	Q9NSK7	152 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	DAPK2	Q9UIK4	370 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	PEX16	Q9Y5Y5	336 aa		11.41	□□□□□ -0.58
SCAP-211	ENST00000485967	TRAV24	A0A0B4J272	114 aa		11.4	□□□□□ -0.58
SCAP-211	ENST00000485967	hADV38S2	A0JD32	116 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms