RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 DAPL1A0PJW8 107 aa15.33■□□□□ 0.04
COL27A1-205ENST00000485397 ODAMA1E959 279 aa15.33■□□□□ 0.04
COL27A1-205ENST00000485397 FUOMA2VDF0 154 aa15.33■□□□□ 0.04
COL27A1-205ENST00000485397 J3QRE1 110 aa15.33■□□□□ 0.04
COL27A1-205ENST00000485397 TOR1AO14656 332 aa15.33■□□□□ 0.04
COL27A1-205ENST00000485397 SLC16A6O15403 523 aa15.33■□□□□ 0.04
COL27A1-205ENST00000485397 OR2F2O95006 317 aa15.33■□□□□ 0.04
COL27A1-205ENST00000485397 PF4P02776 101 aa15.33■□□□□ 0.04
COL27A1-205ENST00000485397 HTR1AP08908 422 aa15.33■□□□□ 0.04
COL27A1-205ENST00000485397 HLA-DRB5Q30154 266 aa15.33■□□□□ 0.04
COL27A1-205ENST00000485397 TPTE2P1Q5T6R2 138 aa15.33■□□□□ 0.04
COL27A1-205ENST00000485397 KCTD20Q7Z5Y7 419 aa15.33■□□□□ 0.04
COL27A1-205ENST00000485397 NEK6Q9HC98 313 aa15.33■□□□□ 0.04
COL27A1-205ENST00000485397 LY6LH3BQJ8 138 aa15.32■□□□□ 0.04
COL27A1-205ENST00000485397 BUB1B-PAK6H3BSN5 160 aa15.32■□□□□ 0.04
COL27A1-205ENST00000485397 J3QLW9 94 aa15.32■□□□□ 0.04
COL27A1-205ENST00000485397 SLC33A1O00400 549 aaPredicted RBP15.32■□□□□ 0.04
COL27A1-205ENST00000485397 MT-ND2P03891 347 aa15.32■□□□□ 0.04
COL27A1-205ENST00000485397 ZNF19P17023 458 aa15.32■□□□□ 0.04
COL27A1-205ENST00000485397 PTGFRP43088 359 aa15.32■□□□□ 0.04
COL27A1-205ENST00000485397 CCR9P51686 369 aa15.32■□□□□ 0.04
COL27A1-205ENST00000485397 RBM39Q14498 530 aaKnown RBP15.32■□□□□ 0.04
COL27A1-205ENST00000485397 ATXN7L3Q14CW9 347 aaPredicted RBP15.32■□□□□ 0.04
COL27A1-205ENST00000485397 C17orf58Q2M2W7 97 aa15.32■□□□□ 0.04
COL27A1-205ENST00000485397 C9orf152Q5JTZ5 239 aa15.32■□□□□ 0.04
COL27A1-205ENST00000485397 KRBOX4Q5JUW0 171 aa15.32■□□□□ 0.04
COL27A1-205ENST00000485397 OR13C3Q8NGS6 347 aa15.32■□□□□ 0.04
COL27A1-205ENST00000485397 TRUB1Q8WWH5 349 aaKnown RBP15.32■□□□□ 0.04
COL27A1-205ENST00000485397 PELI1Q96FA3 418 aa15.32■□□□□ 0.04
COL27A1-205ENST00000485397 PPIL3Q9H2H8 161 aaKnown RBP15.32■□□□□ 0.04
COL27A1-205ENST00000485397 IMPAD1Q9NX62 359 aa15.32■□□□□ 0.04
COL27A1-205ENST00000485397 PCDHGB5Q9Y5G0 923 aa15.32■□□□□ 0.04
COL27A1-205ENST00000485397 OR4C45A6NMZ5 311 aa15.31■□□□□ 0.04
COL27A1-205ENST00000485397 K7EIL1 84 aa15.31■□□□□ 0.04
COL27A1-205ENST00000485397 OR3A4PP47883 348 aa15.31■□□□□ 0.04
COL27A1-205ENST00000485397 ARHGDIBP52566 201 aa15.31■□□□□ 0.04
COL27A1-205ENST00000485397 KHDC1LQ5JSQ8 128 aa15.31■□□□□ 0.04
COL27A1-205ENST00000485397 OR4X2Q8NGF9 303 aa15.31■□□□□ 0.04
COL27A1-205ENST00000485397 OR4D6Q8NGJ1 314 aa15.31■□□□□ 0.04
COL27A1-205ENST00000485397 C4orf36Q96KX1 117 aa15.31■□□□□ 0.04
COL27A1-205ENST00000485397 ZCCHC4Q9H5U6 513 aa15.31■□□□□ 0.04
COL27A1-205ENST00000485397 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.31■□□□□ 0.04
COL27A1-205ENST00000485397 AASSQ9UDR5 926 aa15.31■□□□□ 0.04
COL27A1-205ENST00000485397 A0A087X0M5 115 aa15.3■□□□□ 0.04
COL27A1-205ENST00000485397 A0A1B0GX30 115 aa15.3■□□□□ 0.04
COL27A1-205ENST00000485397 DEGS1O15121 323 aa15.3■□□□□ 0.04
COL27A1-205ENST00000485397 CSN2P05814 226 aa15.3■□□□□ 0.04
COL27A1-205ENST00000485397 NFYBP25208 207 aa15.3■□□□□ 0.04
COL27A1-205ENST00000485397 CEACAM3P40198 252 aa15.3■□□□□ 0.04
COL27A1-205ENST00000485397 PRRX1P54821 245 aa15.3■□□□□ 0.04
COL27A1-205ENST00000485397 SLC35A2P78381 396 aa15.3■□□□□ 0.04
COL27A1-205ENST00000485397 ALKBH1Q13686 389 aaKnown RBP15.3■□□□□ 0.04
COL27A1-205ENST00000485397 CDK5R1Q15078 307 aa15.3■□□□□ 0.04
COL27A1-205ENST00000485397 SAXO1Q8IYX7 474 aa15.3■□□□□ 0.04
COL27A1-205ENST00000485397 CREB3L1Q96BA8 519 aa15.3■□□□□ 0.04
COL27A1-205ENST00000485397 HRASLS5Q96KN8 279 aa15.3■□□□□ 0.04
COL27A1-205ENST00000485397 INPP5EQ9NRR6 644 aa15.3■□□□□ 0.04
COL27A1-205ENST00000485397 MYRFQ9Y2G1 1151 aa15.3■□□□□ 0.04
COL27A1-205ENST00000485397 ZNF729A6NN14 1252 aaPredicted RBP15.29■□□□□ 0.04
COL27A1-205ENST00000485397 TMEM225BP0DP42 221 aa15.29■□□□□ 0.04
COL27A1-205ENST00000485397 RASSF2P50749 326 aa15.29■□□□□ 0.04
COL27A1-205ENST00000485397 KRTAP10-11P60412 298 aa15.29■□□□□ 0.04
COL27A1-205ENST00000485397 ZP1P60852 638 aa15.29■□□□□ 0.04
COL27A1-205ENST00000485397 ZIK1Q3SY52 487 aaPredicted RBP15.29■□□□□ 0.04
COL27A1-205ENST00000485397 SLC25A30Q5SVS4 291 aa15.29■□□□□ 0.04
COL27A1-205ENST00000485397 ACBD7Q8N6N7 88 aa15.29■□□□□ 0.04
COL27A1-205ENST00000485397 CHST4Q8NCG5 386 aa15.29■□□□□ 0.04
COL27A1-205ENST00000485397 KIRREL1Q96J84 757 aa15.29■□□□□ 0.04
COL27A1-205ENST00000485397 RHOFQ9HBH0 211 aa15.29■□□□□ 0.04
COL27A1-205ENST00000485397 EXOGQ9Y2C4 368 aaKnown RBP15.29■□□□□ 0.04
COL27A1-205ENST00000485397 KBTBD11-OT1A0A1B0GTJ5 212 aa15.28■□□□□ 0.04
COL27A1-205ENST00000485397 HSPB6O14558 160 aa15.28■□□□□ 0.04
COL27A1-205ENST00000485397 IGHV3-7P01780 117 aa15.28■□□□□ 0.04
COL27A1-205ENST00000485397 HCKP08631 526 aa15.28■□□□□ 0.04
COL27A1-205ENST00000485397 CGB3P0DN86 165 aa15.28■□□□□ 0.04
COL27A1-205ENST00000485397 CGB7P0DN87 165 aa15.28■□□□□ 0.04
COL27A1-205ENST00000485397 MNDAP41218 407 aa15.28■□□□□ 0.04
COL27A1-205ENST00000485397 SNRPGP62308 76 aaKnown RBP15.28■□□□□ 0.04
COL27A1-205ENST00000485397 MEDAGQ5VYS4 303 aa15.28■□□□□ 0.04
COL27A1-205ENST00000485397 CCDC144NLQ6NUI1 221 aa15.28■□□□□ 0.04
COL27A1-205ENST00000485397 OR9G1Q8NH87 305 aa15.28■□□□□ 0.04
COL27A1-205ENST00000485397 LGALS12Q96DT0 336 aa15.28■□□□□ 0.04
COL27A1-205ENST00000485397 RCC1LQ96I51 464 aaKnown RBP15.28■□□□□ 0.04
COL27A1-205ENST00000485397 NR1H4Q96RI1 486 aaPredicted RBP15.28■□□□□ 0.04
COL27A1-205ENST00000485397 FAM53CQ9NYF3 392 aa15.28■□□□□ 0.04
COL27A1-205ENST00000485397 OR6C3Q9NZP0 311 aa15.28■□□□□ 0.04
COL27A1-205ENST00000485397 WI2-2373I1.2A0A1W2PRP0 233 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 OOSP1A8MZH6 123 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 E9PQ18 207 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 H0YJX3 145 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 ALPLP05186 524 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 GLP1RP43220 463 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 KISS1Q15726 138 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 LHFPL3Q86UP9 236 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 OSR2Q8N2R0 312 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 OR13A1Q8NGR1 328 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 PYDC1Q8WXC3 89 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 LEAP2Q969E1 77 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 RPEQ96AT9 228 aa15.27■□□□□ 0.04
COL27A1-205ENST00000485397 ALG8Q9BVK2 526 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms