RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 BDH1Q02338 343 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 CCDC58Q4VC31 144 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 BCDIN3DQ7Z5W3 292 aaKnown RBP10.39□□□□□ -0.75
HDAC6-227ENST00000485102 RTN4RL2Q86UN3 420 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 ZNF676Q8N7Q3 588 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 BPIFB6Q8NFQ5 453 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 B9D2Q9BPU9 175 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 DPM3Q9P2X0 92 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 PSORS1C1Q9UIG5 152 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 OR52A1Q9UKL2 312 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 HHLA2Q9UM44 414 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 SLC7A11Q9UPY5 501 aa10.39□□□□□ -0.75
HDAC6-227ENST00000485102 MYL12BO14950 172 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 OR2F2O95006 317 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 FUT6P51993 359 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 GBX2P52951 348 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-227ENST00000485102 ST3GAL4Q11206 333 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 DCTN2Q13561 401 aaKnown RBP10.38□□□□□ -0.75
HDAC6-227ENST00000485102 ZNF146Q15072 292 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 DEFB121Q5J5C9 76 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 BCL2L15Q5TBC7 163 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 OR52W1Q6IF63 320 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 Q8IYB0 196 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 YIPF7Q8N8F6 280 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 LINC00482Q8N8I6 264 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 OR4X2Q8NGF9 303 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 OR52N1Q8NH53 320 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 NDNFQ8TB73 568 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 THRSPQ92748 146 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 C10orf35Q96D05 121 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 RBM14Q96PK6 669 aaKnown RBP10.38□□□□□ -0.75
HDAC6-227ENST00000485102 ALG8Q9BVK2 526 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 MND1Q9BWT6 205 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 UBE2J1Q9Y385 318 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-227ENST00000485102 LRRC42Q9Y546 428 aa10.38□□□□□ -0.75
HDAC6-227ENST00000485102 IGKV1-27A0A075B6S5 117 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 M0QZK8 103 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 MGST3O14880 152 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 IGLV1-47P01700 117 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 AMY1AP04745 511 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 AMY2AP04746 511 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 CD34P28906 385 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 SLC6A1P30531 599 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 CCR9P51686 369 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 ARHGDIBP52566 201 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 UBE2V2Q15819 145 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 HEPN1Q6WQI6 88 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 BATF2Q8N1L9 274 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 SVOPQ8N4V2 548 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 OR52N4Q8NGI2 321 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 OR52I1Q8NGK6 324 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 ZNF596Q8TC21 504 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 GGHQ92820 318 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 CORO2AQ92828 525 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 CREB3L1Q96BA8 519 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 NEK6Q9HC98 313 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 ERVK13-1Q9NX77 482 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 MRM2Q9UI43 246 aaKnown RBP10.37□□□□□ -0.75
HDAC6-227ENST00000485102 GNG8Q9UK08 70 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 MYRFQ9Y2G1 1151 aa10.37□□□□□ -0.75
HDAC6-227ENST00000485102 MEX3AA1L020 520 aaKnown RBP10.36□□□□□ -0.75
HDAC6-227ENST00000485102 A6NIN4 97 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 LEUTXA8MZ59 168 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 RGS10O43665 173 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 PSPNO60542 156 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 GATBO75879 557 aaKnown RBP10.36□□□□□ -0.75
HDAC6-227ENST00000485102 MMP23AO75900 390 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 HAND1O96004 215 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 CDK1P06493 297 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 LPLP06858 475 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 HTR1AP08908 422 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 UBCP0CG48 685 aaKnown RBP10.36□□□□□ -0.75
HDAC6-227ENST00000485102 VSIG8P0DPA2 414 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 CRHBPP24387 322 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 GRK1Q15835 563 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 ABCA11PQ4W5N1 156 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 TMEM244Q5VVB8 128 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 FDX2Q6P4F2 183 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 PRSS48Q7RTY5 328 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 ABHD12Q8N2K0 398 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 DNAAF1Q8NEP3 725 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 CAPSLQ8WWF8 208 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 SLC25A33Q9BSK2 321 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 CHST5Q9GZS9 411 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 COMMD4Q9H0A8 199 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 DUSP21Q9H596 190 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 VCX3AQ9NNX9 186 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 AMBNQ9NP70 447 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 FKBP14Q9NWM8 211 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 TAS2R3Q9NYW6 316 aa10.36□□□□□ -0.75
HDAC6-227ENST00000485102 ZMAT5Q9UDW3 170 aaKnown RBP10.36□□□□□ -0.75
HDAC6-227ENST00000485102 A0A087X0M5 115 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 TRBV2A0A0J9YWF9 115 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 A0A1B0GX30 115 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 FAM230AA0A1W2PPH8 454 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 TMEM212A6NML5 194 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 OOSP1A8MZH6 123 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 PTGES3LE9PB15 166 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 LY6LH3BQJ8 138 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 TNFAIP8O95379 198 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms