RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 SPANXA2-OT1Q8N9U9 137 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 OR5H2Q8NGV7 314 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 OR6K3Q8NGY3 331 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 OR52N1Q8NH53 320 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 YPEL4Q96NS1 127 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 RNF157Q96PX1 679 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 RBP7Q96R05 134 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 OR51E2Q9H255 320 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 USE1Q9NZ43 259 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 RAB26Q9ULW5 256 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 MTCH2Q9Y6C9 303 aa2.81□□□□□ -1.96
VPS13A-211ENST00000484581 POLR3AO14802 1390 aaPredicted RBP2.81□□□□□ -1.96
VPS13A-211ENST00000484581 IGLV3-16A0A075B6K0 115 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 FAM183AA6NL82 134 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 COX7A2P2O60397 106 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 DEXIO95424 95 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 AHSA1O95433 338 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 ATP6V1G2O95670 118 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 KRT7P08729 469 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 MPIP34949 423 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 COILP38432 576 aaPredicted RBP2.8□□□□□ -1.96
VPS13A-211ENST00000484581 MGAT3Q09327 533 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 BTN1A1Q13410 526 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 CLEC12BQ2HXU8 276 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 TBC1D28Q2M2D7 210 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 FAM222AQ5U5X8 452 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 FA2HQ7L5A8 372 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 NT5DC3Q86UY8 548 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 ZDHHC22Q8N966 263 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 GATD1Q8NB37 220 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 STOML3Q8TAV4 291 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 CYYR1Q96J86 154 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 C8orf76Q96K31 380 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 DOK1Q99704 481 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 MARVELD1Q9BSK0 173 aa2.8□□□□□ -1.96
VPS13A-211ENST00000484581 ZSCAN16Q9H4T2 348 aaPredicted RBP2.8□□□□□ -1.96
VPS13A-211ENST00000484581 LGALS9O00182 355 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 CCRL2O00421 344 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 OR7C2O60412 319 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 EPPINO95925 133 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 IMPA1P29218 277 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 PYCR1P32322 319 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 MYL6P60660 151 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 MAGOHP61326 146 aaKnown RBP2.79□□□□□ -1.96
VPS13A-211ENST00000484581 DNAL1Q4LDG9 190 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 KHDRBS2Q5VWX1 349 aaKnown RBP2.79□□□□□ -1.96
VPS13A-211ENST00000484581 FAM71E1Q6IPT2 247 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 SHISA6Q6ZSJ9 500 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 MTERF4Q7Z6M4 381 aaKnown RBP2.79□□□□□ -1.96
VPS13A-211ENST00000484581 MUC15Q8N387 334 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 SLC25A45Q8N413 288 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 C2orf73Q8N5S3 287 aaPredicted RBP2.79□□□□□ -1.96
VPS13A-211ENST00000484581 SLC35G3Q8N808 338 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 OR8A1Q8NGG7 326 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 OR52E4Q8NGH9 312 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 OR4P4Q8NGL7 312 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 CASTOR1Q8WTX7 329 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 ESR2Q92731 530 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 FRZBQ92765 325 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 SMIM12Q96EX1 92 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 LINC01587Q99440 93 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 PRSS27Q9BQR3 290 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 ANAPC13Q9BS18 74 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 MS4A8Q9BY19 250 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 NSRP1Q9H0G5 558 aaKnown RBP2.79□□□□□ -1.96
VPS13A-211ENST00000484581 FBXO6Q9NRD1 293 aaPredicted RBP2.79□□□□□ -1.96
VPS13A-211ENST00000484581 DMAC2Q9NW81 257 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 TAC3Q9UHF0 121 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 ZNF780BQ9Y6R6 833 aa2.79□□□□□ -1.96
VPS13A-211ENST00000484581 TCF21O43680 179 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 SOX14O95416 240 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 PSMG1O95456 288 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 SOD3P08294 240 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 SEC11BP0C7V7 166 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 OCM2P0CE71 109 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 SCGB1C2P0DMR2 95 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 CBX5P45973 191 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 CLDN12P56749 244 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 RAB25P57735 213 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 ZNF816Q0VGE8 651 aaPredicted RBP2.78□□□□□ -1.96
VPS13A-211ENST00000484581 PTGES3Q15185 160 aaKnown RBP2.78□□□□□ -1.96
VPS13A-211ENST00000484581 LRRC26Q2I0M4 334 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 GOLGA7BQ2TAP0 167 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 KLHL12Q53G59 568 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 ZNF678Q5SXM1 525 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 FAM104BQ5XKR9 115 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 DNM1P34Q6PK57 102 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 ZNF773Q6PK81 442 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 ZIC4Q8N9L1 334 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 SCGB1C1Q8TD33 95 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 DTD1Q8TEA8 209 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 TWIST2Q8WVJ9 160 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 DERL3Q96Q80 235 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 FBXL15Q9H469 300 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 TP53TG1Q9Y2A0 90 aa2.78□□□□□ -1.96
VPS13A-211ENST00000484581 MAP3K5Q99683 1374 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 RAB3GAP2Q9H2M9 1393 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 IGHV2-26A0A0B4J1V2 119 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 C8orf87E5RJ46 101 aa2.77□□□□□ -1.97
VPS13A-211ENST00000484581 K7EPK0 472 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms