RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 CAMLGP49069 296 aa16.98■□□□□ 0.31
LIMS2-215ENST00000484252 GFRA1P56159 465 aa16.98■□□□□ 0.31
LIMS2-215ENST00000484252 MIDNQ504T8 468 aa16.98■□□□□ 0.31
LIMS2-215ENST00000484252 DCAF12Q5T6F0 453 aa16.98■□□□□ 0.31
LIMS2-215ENST00000484252 SLC25A26Q70HW3 274 aa16.98■□□□□ 0.31
LIMS2-215ENST00000484252 SLC16A13Q7RTY0 426 aa16.98■□□□□ 0.31
LIMS2-215ENST00000484252 CALHM1Q8IU99 346 aa16.98■□□□□ 0.31
LIMS2-215ENST00000484252 SAXO1Q8IYX7 474 aa16.98■□□□□ 0.31
LIMS2-215ENST00000484252 AKR1E2Q96JD6 320 aa16.98■□□□□ 0.31
LIMS2-215ENST00000484252 LINC00470Q9BZP3 86 aa16.98■□□□□ 0.31
LIMS2-215ENST00000484252 RCL1Q9Y2P8 373 aaKnown RBP16.98■□□□□ 0.31
LIMS2-215ENST00000484252 SERPINA7P05543 415 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 CYB561P49447 251 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 SSPNQ14714 243 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 EIF2S3LQ2VIR3 472 aaKnown RBP16.97■□□□□ 0.31
LIMS2-215ENST00000484252 SNIP1Q8TAD8 396 aaKnown RBP16.97■□□□□ 0.31
LIMS2-215ENST00000484252 ABHD3Q8WU67 409 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 ZDHHC8Q9ULC8 765 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 IGKV3D-15A0A087WSY6 115 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 RND3P61587 244 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 Q6ZPA2 131 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 DPPA2Q7Z7J5 298 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 ZNF561Q8N587 486 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 SLC35G3Q8N808 338 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 SECTM1Q8WVN6 248 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 TP53RKQ96S44 253 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 SPIN2AQ99865 258 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 SPIN2BQ9BPZ2 258 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 C19orf12Q9NSK7 152 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 DEPPQ9NTK1 212 aa16.97■□□□□ 0.31
LIMS2-215ENST00000484252 METTL1Q9UBP6 276 aaKnown RBP16.97■□□□□ 0.31
LIMS2-215ENST00000484252 BOKQ9UMX3 212 aaPredicted RBP16.97■□□□□ 0.31
LIMS2-215ENST00000484252 WDR87Q6ZQQ6 2873 aa16.96■□□□□ 0.31
LIMS2-215ENST00000484252 TRDCB7Z8K6 153 aa16.96■□□□□ 0.31
LIMS2-215ENST00000484252 ZNF587BE7ETH6 402 aa16.96■□□□□ 0.31
LIMS2-215ENST00000484252 PPT1P50897 306 aa16.96■□□□□ 0.31
LIMS2-215ENST00000484252 RPS18P62269 152 aaKnown RBP16.96■□□□□ 0.31
LIMS2-215ENST00000484252 ZNF616Q08AN1 781 aa16.96■□□□□ 0.31
LIMS2-215ENST00000484252 GUK1Q16774 197 aa16.96■□□□□ 0.31
LIMS2-215ENST00000484252 CLEC9AQ6UXN8 241 aa16.96■□□□□ 0.31
LIMS2-215ENST00000484252 CPEB3Q8NE35 698 aaKnown RBP16.96■□□□□ 0.31
LIMS2-215ENST00000484252 HPSE2Q8WWQ2 592 aa16.96■□□□□ 0.31
LIMS2-215ENST00000484252 EXTL1Q92935 676 aa16.96■□□□□ 0.31
LIMS2-215ENST00000484252 ABHD14BQ96IU4 210 aa16.96■□□□□ 0.31
LIMS2-215ENST00000484252 TMEM222Q9H0R3 208 aa16.96■□□□□ 0.31
LIMS2-215ENST00000484252 PATE3B3GLJ2 98 aa16.95■□□□□ 0.3
LIMS2-215ENST00000484252 NME2P1O60361 137 aa16.95■□□□□ 0.3
LIMS2-215ENST00000484252 MRPL33O75394 65 aaKnown RBP16.95■□□□□ 0.3
LIMS2-215ENST00000484252 SSTP61278 116 aa16.95■□□□□ 0.3
LIMS2-215ENST00000484252 DAZAP2Q15038 168 aaPredicted RBP16.95■□□□□ 0.3
LIMS2-215ENST00000484252 PDCD1Q15116 288 aa16.95■□□□□ 0.3
LIMS2-215ENST00000484252 ZNF845Q96IR2 970 aaPredicted RBP16.95■□□□□ 0.3
LIMS2-215ENST00000484252 TMEM56Q96MV1 263 aa16.95■□□□□ 0.3
LIMS2-215ENST00000484252 P4HTMQ9NXG6 502 aa16.95■□□□□ 0.3
LIMS2-215ENST00000484252 TMEM56-RWDD3S4R434 201 aa16.95■□□□□ 0.3
LIMS2-215ENST00000484252 GLI4P10075 376 aa16.95■□□□□ 0.3
LIMS2-215ENST00000484252 NPBWR2P48146 333 aa16.95■□□□□ 0.3
LIMS2-215ENST00000484252 C6orf15Q6UXA7 325 aaPredicted RBP16.95■□□□□ 0.3
LIMS2-215ENST00000484252 MEX3BQ6ZN04 569 aaKnown RBP16.95■□□□□ 0.3
LIMS2-215ENST00000484252 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.95■□□□□ 0.3
LIMS2-215ENST00000484252 LFNGQ8NES3 379 aa16.95■□□□□ 0.3
LIMS2-215ENST00000484252 BOD1Q96IK1 185 aa16.95■□□□□ 0.3
LIMS2-215ENST00000484252 PBDC1Q9BVG4 233 aa16.95■□□□□ 0.3
LIMS2-215ENST00000484252 REPIN1Q9BWE0 567 aaKnown RBP16.95■□□□□ 0.3
LIMS2-215ENST00000484252 SCRT1Q9BWW7 348 aa16.95■□□□□ 0.3
LIMS2-215ENST00000484252 MIOXQ9UGB7 285 aa16.95■□□□□ 0.3
LIMS2-215ENST00000484252 DUXBA0A1W2PPF3 345 aa16.94■□□□□ 0.3
LIMS2-215ENST00000484252 IGHV2-70P01814 119 aa16.94■□□□□ 0.3
LIMS2-215ENST00000484252 PRH1P02810 166 aa16.94■□□□□ 0.3
LIMS2-215ENST00000484252 TK1P04183 234 aa16.94■□□□□ 0.3
LIMS2-215ENST00000484252 COX5BP10606 129 aa16.94■□□□□ 0.3
LIMS2-215ENST00000484252 FGF12P61328 243 aa16.94■□□□□ 0.3
LIMS2-215ENST00000484252 EWSR1Q01844 656 aaKnown RBP eCLIP16.94■□□□□ 0.3
LIMS2-215ENST00000484252 PAPOLGQ9BWT3 736 aaKnown RBP16.94■□□□□ 0.3
LIMS2-215ENST00000484252 BCL2L14Q9BZR8 327 aa16.94■□□□□ 0.3
LIMS2-215ENST00000484252 PARP12Q9H0J9 701 aaKnown RBP16.94■□□□□ 0.3
LIMS2-215ENST00000484252 C11orf1Q9H5F2 150 aa16.94■□□□□ 0.3
LIMS2-215ENST00000484252 Q9N2K0 584 aa16.94■□□□□ 0.3
LIMS2-215ENST00000484252 PINLYPA6NC86 204 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 LMO1P25800 156 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 GNRHRP30968 328 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 NHLH2Q02577 135 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 FOXO1Q12778 655 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 ZNF266Q14584 549 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 MPV17LQ2QL34 196 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 OR2C3Q8N628 320 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 ZNF565Q8N9K5 539 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 OR56B2PQ8NGI1 322 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 CT55Q8WUE5 264 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 UBE2J1Q9Y385 318 aaPredicted RBP16.93■□□□□ 0.3
LIMS2-215ENST00000484252 A0A1B0GW64 132 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 NAPSAO96009 420 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 ARF1P84077 181 aaKnown RBP16.93■□□□□ 0.3
LIMS2-215ENST00000484252 PRDX4Q13162 271 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 RBMS3Q6XE24 437 aaKnown RBP16.93■□□□□ 0.3
LIMS2-215ENST00000484252 ZNF695Q8IW36 515 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 CDX2Q99626 313 aaPredicted RBP16.93■□□□□ 0.3
LIMS2-215ENST00000484252 EIF5A2Q9GZV4 153 aaKnown RBP16.93■□□□□ 0.3
LIMS2-215ENST00000484252 TUBA4BQ9H853 241 aa16.93■□□□□ 0.3
LIMS2-215ENST00000484252 SLC7A10Q9NS82 523 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms