RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 OR14J1Q9UGF5 321 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 EXOGQ9Y2C4 368 aaKnown RBP5.02□□□□□ -1.61
PTCD3-215ENST00000484203 LINC00312Q9Y6C7 94 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 MINOS1-NBL1R4GNA1 71 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 TRGV10A0A0A0MS01 117 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 LOC100130705A0A1B0GUX0 176 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 H3BNX3 289 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 J3QLW9 94 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 J3QRE1 110 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 MAGEB4O15481 346 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-215ENST00000484203 SYNGR1O43759 233 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 ZNF737O75373 536 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 HAND1O96004 215 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 SELLP14151 372 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 ZNF19P17023 458 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 OMGP23515 440 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 GABRR1P24046 479 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 AZGP1P25311 298 aaKnown RBP5.01□□□□□ -1.61
PTCD3-215ENST00000484203 DCKP27707 260 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 KIR2DS4P43632 304 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 DYNLT3P51808 116 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 EDDM3BP56851 147 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 COL10A1Q03692 680 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 ZNF85Q03923 595 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 PDZK1IP1Q13113 114 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 ALKBH1Q13686 389 aaKnown RBP5.01□□□□□ -1.61
PTCD3-215ENST00000484203 TAF9Q16594 264 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 ZSCAN26Q16670 478 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 ODF4Q2M2E3 257 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 C2orf68Q2NKX9 166 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 TP53I3Q53FA7 332 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 TTC23Q5W5X9 447 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 SSX6Q7RTT6 188 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 RTN4RL2Q86UN3 420 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 ANGPTL5Q86XS5 388 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 PDZD9Q8IXQ8 264 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 PQLC1Q8N2U9 271 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 PRSS35Q8N3Z0 413 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 PARP16Q8N5Y8 322 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 PACRGLQ8N7B6 248 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 SETD9Q8NE22 299 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 OR11H6Q8NGC7 330 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 OR13C3Q8NGS6 347 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 OR5AK2Q8NH90 309 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 OR2T6Q8NHC8 308 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 LINC01006Q8NI28 216 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 TRMT10AQ8TBZ6 339 aaKnown RBP5.01□□□□□ -1.61
PTCD3-215ENST00000484203 RPS4Y2Q8TD47 263 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 THRSPQ92748 146 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 FGGYQ96C11 551 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 LGALS12Q96DT0 336 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 PELI1Q96FA3 418 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 AKR1E2Q96JD6 320 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 C4orf36Q96KX1 117 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 ZNF714Q96N38 554 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 OPALINQ96PE5 141 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 SSX3Q99909 188 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 ALG8Q9BVK2 526 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 MMP27Q9H306 513 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 TCF7L1Q9HCS4 588 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 S100A14Q9HCY8 104 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 HMG20AQ9NP66 347 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 EXOSC4Q9NPD3 245 aaKnown RBP5.01□□□□□ -1.61
PTCD3-215ENST00000484203 C19orf12Q9NSK7 152 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 PAK1IP1Q9NWT1 392 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-215ENST00000484203 CHCHD3Q9NX63 227 aaKnown RBP5.01□□□□□ -1.61
PTCD3-215ENST00000484203 SMPD3Q9NY59 655 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-215ENST00000484203 TAS2R3Q9NYW6 316 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 MTCH1Q9NZJ7 389 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 DHDHQ9UQ10 334 aa5.01□□□□□ -1.61
PTCD3-215ENST00000484203 UBE2J1Q9Y385 318 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-215ENST00000484203 TRRAPQ9Y4A5 3859 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 TANC2Q9HCD6 1990 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 A6NIN4 97 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 FAM90A8PA6NJQ4 464 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 OR4C45A6NMZ5 311 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 E9PQ18 207 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 H3BUX3 64 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 SULT1B1O43704 296 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 ZNF780AO75290 641 aaPredicted RBP5□□□□□ -1.61
PTCD3-215ENST00000484203 KDM4BO94953 1096 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 CSN2P05814 226 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 IGHV1-8P0DP01 117 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 MYL12AP19105 171 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 RAB3AP20336 220 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 LMO1P25800 156 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 BRS3P32247 399 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 CEACAM3P40198 252 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 KIR3DL2P43630 455 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 KCNJ3P48549 501 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 MTNR1BP49286 362 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 POU3F4P49335 361 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 P2RX3P56373 397 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 PROK1P58294 105 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 ELF3P78545 371 aaPredicted RBP5□□□□□ -1.61
PTCD3-215ENST00000484203 ZNF91Q05481 1191 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 GRK1Q15835 563 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 ZIK1Q3SY52 487 aaPredicted RBP5□□□□□ -1.61
PTCD3-215ENST00000484203 ZNF626Q68DY1 528 aa5□□□□□ -1.61
PTCD3-215ENST00000484203 CCDC144NLQ6NUI1 221 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms