RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 RDH5Q92781 318 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 SEH1LQ96EE3 360 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 C18orf12Q96KH6 178 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 ZNF488Q96MN9 340 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 CACNG6Q9BXT2 260 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 DNTTIP1Q9H147 329 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 IFT46Q9NQC8 304 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 TMEM106BQ9NUM4 274 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 TREM2Q9NZC2 230 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 RCC2Q9P258 522 aaKnown RBP11.75□□□□□ -0.53
SMAD9-204ENST00000483941 MGAT4AQ9UM21 535 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 WIPI2Q9Y4P8 454 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 STAB1Q9NY15 2570 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 ROS1P08922 2347 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 TMEM235A6NFC5 223 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 OOEPA6NGQ2 149 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 OR2AT4A6NND4 320 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 KIAA1324LA8MWY0 1029 aaPredicted RBP11.74□□□□□ -0.53
SMAD9-204ENST00000483941 F8VVB4 439 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 F8VWA3 439 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 LGALS8O00214 317 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 CD8AP01732 235 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 SOD3P08294 240 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 TBPP20226 339 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 DTYMKP23919 212 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 RCVRNP35243 200 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 MADCAM1Q13477 382 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 DYRK1AQ13627 763 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 BAK1Q16611 211 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 RGS21Q2M5E4 152 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 SHEQ5VZ18 495 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 C6orf201Q7Z4U5 140 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 PRIMA1Q86XR5 153 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 GCSAMQ8N6F7 178 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 OR52I2Q8NH67 350 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 CCL17Q92583 94 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 YIPF5Q969M3 257 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 TIMD4Q96H15 378 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 SDHCQ99643 169 aaPredicted RBP11.74□□□□□ -0.53
SMAD9-204ENST00000483941 CMSS1Q9BQ75 279 aaKnown RBP11.74□□□□□ -0.53
SMAD9-204ENST00000483941 OCSTAMPQ9BR26 566 aa11.74□□□□□ -0.53
SMAD9-204ENST00000483941 DPCDQ9BVM2 203 aaPredicted RBP11.74□□□□□ -0.53
SMAD9-204ENST00000483941 MYOZ1Q9NP98 299 aaPredicted RBP11.74□□□□□ -0.53
SMAD9-204ENST00000483941 RBMX2Q9Y388 322 aaKnown RBP11.74□□□□□ -0.53
SMAD9-204ENST00000483941 ZANQ9Y493 2812 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 PPIAL4EA0A075B759 164 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 A0A1W2PQ09 198 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 FUOMA2VDF0 154 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 NAP1L6A6NFF2 107 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 NKX6-3A6NJ46 265 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 PPIAL4DF5H284 164 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 TMEM178BH3BS89 294 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 ORC5O43913 435 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 OR2H2O95918 312 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 HEXAP06865 529 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 PPIAL4FP0DN26 164 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 PRDX2P32119 198 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 GDNFP39905 211 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 SNU13P55769 128 aaKnown RBP11.73□□□□□ -0.53
SMAD9-204ENST00000483941 TAS2R19P59542 299 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 GMFBP60983 142 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 DGCR2P98153 550 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 SRSF7Q16629 238 aaKnown RBP eCLIP11.73□□□□□ -0.53
SMAD9-204ENST00000483941 ACTBL2Q562R1 376 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 PAN3Q58A45 887 aaKnown RBP11.73□□□□□ -0.53
SMAD9-204ENST00000483941 TEX36Q5VZQ5 186 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 STEAP3Q658P3 488 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 SIGIRRQ6IA17 410 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 Q6P435 159 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 TRAPPC6BQ86SZ2 158 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 LYSMD2Q8IV50 215 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 BATF2Q8N1L9 274 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 ZCCHC24Q8N2G6 241 aaKnown RBP11.73□□□□□ -0.53
SMAD9-204ENST00000483941 BOLLQ8N9W6 283 aaKnown RBP11.73□□□□□ -0.53
SMAD9-204ENST00000483941 SUMF2Q8NBJ7 301 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 MINDY2Q8NBR6 621 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 OR5D13Q8NGL4 314 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 ZMAT3Q9HA38 289 aaKnown RBP11.73□□□□□ -0.53
SMAD9-204ENST00000483941 C12orf4Q9NQ89 552 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 OR14J1Q9UGF5 321 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 PPIAL4AQ9Y536 164 aa11.73□□□□□ -0.53
SMAD9-204ENST00000483941 ANK3Q12955 4377 aaKnown RBP11.72□□□□□ -0.53
SMAD9-204ENST00000483941 ATRQ13535 2644 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 RFPL4AA6NLU0 287 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 RFPL4AL1F8VTS6 287 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 F12P00748 615 aaPredicted RBP11.72□□□□□ -0.53
SMAD9-204ENST00000483941 HPXP02790 462 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 ASAH1Q13510 395 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 DEFB113Q30KQ7 82 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 SLC36A1Q7Z2H8 476 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 MUC20Q8N307 709 aaPredicted RBP11.72□□□□□ -0.53
SMAD9-204ENST00000483941 ZNF561Q8N587 486 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 TMEM229BQ8NBD8 167 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 MED30Q96HR3 178 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 SNX22Q96L94 193 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 FAAP24Q9BTP7 215 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 FAM234AQ9H0X4 552 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 WDR13Q9H1Z4 485 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 ZNF665Q9H7R5 613 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 PLEKHF2Q9H8W4 249 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms