RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 PLCE1Q9P212 2302 aa7.52□□□□□ -1.2
CDC42SE1-204ENST00000483763 ARID1AO14497 2285 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 IGHV2OR16-5A0A0B4J2B6 119 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 C9orf170A2RU37 121 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 OR5B21A6NL26 309 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 J3QW42 95 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 MLNRO43193 412 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 GLRA1P23415 457 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 FABP6P51161 128 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 ZNF154Q13106 437 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 ARL6IP1Q15041 203 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 ZMYND11Q15326 602 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 SAXO1Q8IYX7 474 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 CCDC107Q8WV48 283 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 ANAPC16Q96DE5 110 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 PPA2Q9H2U2 334 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 RANBP3Q9H6Z4 567 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 SH3BGRL2Q9UJC5 107 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 SETXQ7Z333 2677 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 POLEQ07864 2286 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 A0A0G2JNJ9 132 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 IQCF6A8MYZ5 107 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 TRAPPC2LH3BP13 241 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 CCSO14618 274 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 CDIPTO14735 213 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 SLC22A5O76082 557 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 CRHP06850 196 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 SSTR2P30874 369 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 TAS2R46P59540 309 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 GMFBP60983 142 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 SUPT4H1P63272 117 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 IL13RA1P78552 427 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 PPA1Q15181 289 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 ACTBL2Q562R1 376 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 GFRALQ6UXV0 394 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 Q6ZR03 302 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 PEG10Q86TG7 708 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 ZNF573Q86YE8 665 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 C12orf45Q8N5I9 185 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 FAM169BQ8N8A8 192 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 SCCPDHQ8NBX0 429 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 CASTOR1Q8WTX7 329 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 WDR13Q9H1Z4 485 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 ZNF442Q9H7R0 627 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 MSL2Q9HCI7 577 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 Q9UFV3 132 aa7.52□□□□□ -1.21
CDC42SE1-204ENST00000483763 A8MXE2 369 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 GIPP09681 153 aaPredicted RBP7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 ZNF83P51522 516 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 IL24Q13007 206 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 IKZF1Q13422 519 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 NHLRC3Q5JS37 347 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 C20orf204Q6ZNR8 217 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 LYG2Q86SG7 212 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 MKXQ8IYA7 352 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 ZNF843Q8N446 348 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 ZNF2Q9BSG1 426 aaPredicted RBP7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 ADAT1Q9BUB4 502 aaKnown RBP7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 RCC2Q9P258 522 aaKnown RBP7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 SLC23A1Q9UHI7 598 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 TRAV24A0A0B4J272 114 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 PRRG2O14669 202 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 HS3ST1O14792 307 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 OR5H8P0DN80 308 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 RPS2P15880 293 aaKnown RBP7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 DTYMKP23919 212 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 CCKARP32238 428 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 HTR2BP41595 481 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 NAAAQ02083 359 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 MPPED2Q15777 294 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 C11orf53Q8IXP5 236 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 MITD1Q8WV92 249 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 USB1Q9BQ65 265 aaKnown RBP7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 SFXN3Q9BWM7 321 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 HEXA-AS1Q9H8Q6 139 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 PCDHB16Q9NRJ7 776 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 MBD2Q9UBB5 411 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 TUBD1Q9UJT1 453 aa7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 PURGQ9UJV8 347 aaKnown RBP7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 NOP16Q9Y3C1 178 aaKnown RBP7.51□□□□□ -1.21
CDC42SE1-204ENST00000483763 PLSCR5A0PG75 271 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 EEF1E1-BLOC1S5C9J1V9 151 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 F5H5P2 479 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 KNG1P01042 644 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 GRPP07492 148 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 CD34P28906 385 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 RAP2BP61225 183 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 S100A12P80511 92 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 DHODHQ02127 395 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 TM4SF20Q53R12 229 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 TMEM128Q5BJH2 165 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 TIMM23BQ5SRD1 257 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 C11orf88Q6PI97 169 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 SLC22A25Q6T423 547 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 ZNF826PQ6ZT77 177 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 LRP11Q86VZ4 500 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 FAM58AQ8N1B3 248 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 GTF3AQ92664 365 aaKnown RBP7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 RDH5Q92781 318 aa7.5□□□□□ -1.21
CDC42SE1-204ENST00000483763 SEC22AQ96IW7 307 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms