RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 OPCMLQ14982 345 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 GRK1Q15835 563 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 DCAF12L2Q5VW00 463 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 OTPQ5XKR4 325 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 FAAP20Q6NZ36 180 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 ZNF585AQ6P3V2 769 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 TIPARPQ7Z3E1 657 aaKnown RBP6.64□□□□□ -1.35
SNX13-208ENST00000482558 LYG2Q86SG7 212 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 YRDCQ86U90 279 aaKnown RBP6.64□□□□□ -1.35
SNX13-208ENST00000482558 ZDHHC23Q8IYP9 409 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 OR11H4Q8NGC9 324 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 OR51T1Q8NGJ9 327 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 OR5M8Q8NGP6 311 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 OR4K15Q8NH41 348 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 OR10D3Q8NH80 312 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 TERB2Q8NHR7 220 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 MITD1Q8WV92 249 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 THOC3Q96J01 351 aaKnown RBP6.64□□□□□ -1.35
SNX13-208ENST00000482558 WWC2-AS2Q96NR7 200 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 DHRS9Q9BPW9 319 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 SRXN1Q9BYN0 137 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 CHST6Q9GZX3 395 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 METTL9Q9H1A3 318 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 HEXA-AS1Q9H8Q6 139 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 TMEM9BQ9NQ34 198 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 MED9Q9NWA0 146 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 IL36GQ9NZH8 169 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 ZNF224Q9NZL3 707 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 KLK13Q9UKR3 277 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 SLC7A11Q9UPY5 501 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 FOXA2Q9Y261 457 aaPredicted RBP6.64□□□□□ -1.35
SNX13-208ENST00000482558 PIGLQ9Y2B2 252 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 LSM4Q9Y4Z0 139 aaKnown RBP6.64□□□□□ -1.35
SNX13-208ENST00000482558 AUP1Q9Y679 476 aa6.64□□□□□ -1.35
SNX13-208ENST00000482558 LOC101059948A0A1B0GTJ6 334 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 MFNGO00587 321 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 GOSR2O14653 212 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 CXCL13O43927 109 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 LMX1BO60663 402 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 MRPL33O75394 65 aaKnown RBP6.63□□□□□ -1.35
SNX13-208ENST00000482558 OR2F2O95006 317 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 HLA-AP01891 365 aaKnown RBP6.63□□□□□ -1.35
SNX13-208ENST00000482558 SERPINA5P05154 406 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 FCGR2AP12318 317 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 ZBTB25P24278 435 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 IER3P46695 156 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 OR3A3P47888 321 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 OR3A2P47893 321 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 NPBWR1P48145 328 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 RBP2P50120 134 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 FUT6P51993 359 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 ATP1B3P54709 279 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 DHRS2Q13268 280 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 OR2F1Q13607 317 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 ARFRP1Q13795 201 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 MOGAT2Q3SYC2 334 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 SCGB2B2Q4G0G5 96 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 LBHQ53QV2 105 aaPredicted RBP6.63□□□□□ -1.35
SNX13-208ENST00000482558 TMEM128Q5BJH2 165 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 DCAF10Q5QP82 559 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 THOC7Q6I9Y2 204 aaKnown RBP6.63□□□□□ -1.35
SNX13-208ENST00000482558 OR10K2Q6IF99 312 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 PLXDC2Q6UX71 529 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 ASCL4Q6XD76 172 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 C3P1Q6ZMU1 363 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 SLC51BQ86UW2 128 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 HOGA1Q86XE5 327 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 GALNT16Q8N428 558 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 ZSCAN4Q8NAM6 433 aaPredicted RBP6.63□□□□□ -1.35
SNX13-208ENST00000482558 PXT1Q8NFP0 134 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 OR2M7Q8NG81 312 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 OR4D10Q8NGI6 311 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 OR5H2Q8NGV7 314 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 PSMF1Q92530 271 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 DPF1Q92782 380 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 FBXO17Q96EF6 278 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 C1orf147Q96MC9 270 aaPredicted RBP6.63□□□□□ -1.35
SNX13-208ENST00000482558 SLC6A7Q99884 636 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 CHIAQ9BZP6 476 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 TMEM231Q9H6L2 316 aa6.63□□□□□ -1.35
SNX13-208ENST00000482558 IGHV3-15A0A0B4J1V0 119 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 PIGBOS1A0A0B4J2F0 54 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 IGKV1-9A0A0C4DH69 117 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 OR5H15A6NDH6 313 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 MEIS3P1A6NDR6 274 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 FAM90A10PA6NDY2 464 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 ZNF587BE7ETH6 402 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 G3V3Q6 166 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 G3V3Y1 287 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 RRP8O43159 456 aaKnown RBP6.62□□□□□ -1.35
SNX13-208ENST00000482558 PET100P0DJ07 73 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 SLC2A1P11166 492 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 MGMTP16455 207 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 GNB3P16520 340 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 DTYMKP23919 212 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 HRH1P35367 487 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 ARR3P36575 388 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 OR3A4PP47883 348 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 HTR5AP47898 357 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 MTCP1P56278 107 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms