RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 MRPL48Q96GC5 212 aaKnown RBP14.88□□□□□ -0.03
CLK1-211ENST00000481641 NR1H4Q96RI1 486 aaPredicted RBP14.88□□□□□ -0.03
CLK1-211ENST00000481641 WNT10AQ9GZT5 417 aa14.88□□□□□ -0.03
CLK1-211ENST00000481641 PPIL3Q9H2H8 161 aaKnown RBP14.88□□□□□ -0.03
CLK1-211ENST00000481641 GAL3ST2Q9H3Q3 398 aa14.88□□□□□ -0.03
CLK1-211ENST00000481641 ZNF286AQ9HBT8 521 aa14.88□□□□□ -0.03
CLK1-211ENST00000481641 ODAMA1E959 279 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 ADARB2-AS1A8MUL3 147 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 DEGS1O15121 323 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 PEX14O75381 377 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 VDAC2P45880 294 aaPredicted RBP14.87□□□□□ -0.03
CLK1-211ENST00000481641 GTF2A1P52655 376 aaPredicted RBP14.87□□□□□ -0.03
CLK1-211ENST00000481641 CDK5R1Q15078 307 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 KRBOX4Q5JUW0 171 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 SAMD5Q5TGI4 173 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 SERPINA12Q8IW75 414 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 SAXO1Q8IYX7 474 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 OR5D14Q8NGL3 314 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 OR5AK2Q8NH90 309 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 TSEN15Q8WW01 171 aaKnown RBP14.87□□□□□ -0.03
CLK1-211ENST00000481641 APH1BQ8WW43 257 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 OCSTAMPQ9BR26 566 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 C9orf16Q9BUW7 83 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 TAS2R3Q9NYW6 316 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 DPM3Q9P2X0 92 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 PCDHGB5Q9Y5G0 923 aa14.87□□□□□ -0.03
CLK1-211ENST00000481641 LOC100130705A0A1B0GUX0 176 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 FUOMA2VDF0 154 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 HSPB6O14558 160 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 SULT1B1O43704 296 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 FADS2O95864 444 aaKnown RBP14.86□□□□□ -0.03
CLK1-211ENST00000481641 BDH1Q02338 343 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 ZSCAN26Q16670 478 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 C17orf58Q2M2W7 97 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 ZNF691Q5VV52 312 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 OR52W1Q6IF63 320 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 PARP16Q8N5Y8 322 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 OR51A2Q8NGJ7 313 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 R3HDM4Q96D70 268 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 Q96MT0 163 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 S100A14Q9HCY8 104 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 FAM118AQ9NWS6 357 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 DHDHQ9UQ10 334 aa14.86□□□□□ -0.03
CLK1-211ENST00000481641 SH2D7A6NKC9 451 aaPredicted RBP14.85□□□□□ -0.03
CLK1-211ENST00000481641 TMEM212A6NML5 194 aa14.85□□□□□ -0.03
CLK1-211ENST00000481641 IGLV1-47P01700 117 aa14.85□□□□□ -0.03
CLK1-211ENST00000481641 PTGFRP43088 359 aa14.85□□□□□ -0.03
CLK1-211ENST00000481641 SOX2P48431 317 aa14.85□□□□□ -0.03
CLK1-211ENST00000481641 GBX2P52951 348 aaPredicted RBP14.85□□□□□ -0.03
CLK1-211ENST00000481641 RAB40BQ12829 278 aa14.85□□□□□ -0.03
CLK1-211ENST00000481641 SMN1Q16637 294 aaKnown RBP14.85□□□□□ -0.03
CLK1-211ENST00000481641 OXLD1Q5BKU9 147 aa14.85□□□□□ -0.03
CLK1-211ENST00000481641 RTN4RL2Q86UN3 420 aa14.85□□□□□ -0.03
CLK1-211ENST00000481641 SATL1Q86VE3 508 aa14.85□□□□□ -0.03
CLK1-211ENST00000481641 NDUFA11Q86Y39 141 aa14.85□□□□□ -0.03
CLK1-211ENST00000481641 OR10K1Q8NGX5 313 aa14.85□□□□□ -0.03
CLK1-211ENST00000481641 ZNF596Q8TC21 504 aa14.85□□□□□ -0.03
CLK1-211ENST00000481641 RGP1Q92546 391 aaPredicted RBP14.85□□□□□ -0.03
CLK1-211ENST00000481641 STMN2Q93045 179 aa14.85□□□□□ -0.03
CLK1-211ENST00000481641 RHOFQ9HBH0 211 aa14.85□□□□□ -0.03
CLK1-211ENST00000481641 A0A1W2PRX2 142 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 H0YJX3 145 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 MPZL2O60487 215 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 ALX3O95076 343 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 IGHV3-7P01780 117 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 CSN2P05814 226 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 CCDC159P0C7I6 412 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 LIMS3P0CW19 117 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 LIMS4P0CW20 117 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 NFYBP25208 207 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 CD34P28906 385 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 EMX1Q04741 257 aaPredicted RBP14.84□□□□□ -0.03
CLK1-211ENST00000481641 RBM39Q14498 530 aaKnown RBP14.84□□□□□ -0.03
CLK1-211ENST00000481641 KPRPQ5T749 579 aaPredicted RBP14.84□□□□□ -0.03
CLK1-211ENST00000481641 XAF1Q6GPH4 301 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 CHST4Q8NCG5 386 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 OR4D6Q8NGJ1 314 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 INPP5EQ9NRR6 644 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 MRPS18AQ9NVS2 196 aaKnown RBP14.84□□□□□ -0.03
CLK1-211ENST00000481641 TAS2R4Q9NYW5 299 aa14.84□□□□□ -0.03
CLK1-211ENST00000481641 RPL36Q9Y3U8 105 aaKnown RBP14.84□□□□□ -0.03
CLK1-211ENST00000481641 TRAV24A0A0B4J272 114 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 LEUTXA8MZ59 168 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 BUB1B-PAK6H3BSN5 160 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 GABRPO00591 440 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 TOR1AO14656 332 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 BRS3P32247 399 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 OR3A4PP47883 348 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 MTNR1BP49286 362 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 HLA-DRB5Q30154 266 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 PQLC1Q8N2U9 271 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 OR5AU1Q8NGC0 362 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 OR13A1Q8NGR1 328 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 TNFAIP8L1Q8WVP5 186 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 LEAP2Q969E1 77 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 MYCBPQ99417 103 aaPredicted RBP14.83□□□□□ -0.04
CLK1-211ENST00000481641 GPER1Q99527 375 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 SLC25A33Q9BSK2 321 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 ZNF581Q9P0T4 197 aa14.83□□□□□ -0.04
CLK1-211ENST00000481641 KIF25Q9UIL4 384 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 661.6 ms