RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 ADAMTSL1Q8N6G6 1762 aa8.34□□□□□ -1.07
GARNL3-216ENST00000481242 WDR90Q96KV7 1748 aa8.34□□□□□ -1.07
GARNL3-216ENST00000481242 TMEM272A0A1B0GTI8 110 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 ERVH48-1M5A8F1 160 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 TSPAN2O60636 221 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 IGF2P01344 180 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 IGHA1P01876 353 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 CD37P11049 281 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 ACP1P24666 158 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 AKR1C3P42330 323 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 MESP2Q0VG99 397 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 C1QL3Q5VWW1 255 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 GTF2H5Q6ZYL4 71 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 RFESDQ8TAC1 157 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 GP6Q9HCN6 339 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 SLC52A3Q9NQ40 469 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 MTCH1Q9NZJ7 389 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 ZNF230Q9UIE0 474 aaPredicted RBP8.33□□□□□ -1.08
GARNL3-216ENST00000481242 NPTNQ9Y639 398 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 PPP5D1E7EU14 171 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 K7ERU9 68 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 CTAG2O75638 210 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 ZNF25P17030 456 aaPredicted RBP8.33□□□□□ -1.08
GARNL3-216ENST00000481242 OR3A1P47881 315 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 OR4F17Q8NGA8 305 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 OR4F5Q8NH21 305 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 PPP1R1CQ8WVI7 109 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 OR4F4Q96R69 305 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 MARVELD1Q9BSK0 173 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 UBTD1Q9HAC8 227 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 HS3ST3B1Q9Y662 390 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 MFSD2BA6NFX1 497 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 ZNF727A8MUV8 499 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 TMPRSS2O15393 492 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 NDUFA2O43678 99 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 DXOO77932 396 aaKnown RBP8.33□□□□□ -1.08
GARNL3-216ENST00000481242 SLC25A6P12236 298 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 ZNF250P15622 560 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 CTSSP25774 331 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 LPAR6P43657 344 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 GPR6P46095 362 aaPredicted RBP8.33□□□□□ -1.08
GARNL3-216ENST00000481242 LGALS7P47929 136 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 ZNF787Q6DD87 383 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 CLEC2AQ6UVW9 174 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 BAGE3Q86Y29 109 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 BAGE2Q86Y30 109 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 ZNF439Q8NDP4 499 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 ACY3Q96HD9 319 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 RIF1Q5UIP0 2472 aaKnown RBP8.33□□□□□ -1.08
GARNL3-216ENST00000481242 ZNF785A8K8V0 405 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 COX7A1P24310 79 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 Q56UQ5 140 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 BPIFCQ8NFQ6 507 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 SLC26A10Q8NG04 563 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 OR5B3Q8NH48 314 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 FAAP24Q9BTP7 215 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 SLC35D1Q9NTN3 355 aa8.33□□□□□ -1.08
GARNL3-216ENST00000481242 PCM1Q15154 2024 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 A0A0J9YW62 118 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 HMSDA8MTL9 139 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 TRDCB7Z8K6 153 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 H3BMH7 237 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 HRKO00198 91 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 PATE4P0C8F1 98 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 PRF1P14222 555 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 LINC00303Q3SY05 128 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 LCN15Q6UWW0 184 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 SHISA5Q8N114 240 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 NFAM1Q8NET5 270 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-216ENST00000481242 PLEKHB1Q9UF11 243 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-216ENST00000481242 NINQ8N4C6 2090 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 OR5H1A6NKK0 313 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 CHEK1O14757 476 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 PHOX2AO14813 284 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 OR2C1O95371 312 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 PDGFBP01127 241 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-216ENST00000481242 RPL7L1Q6DKI1 246 aaKnown RBP8.32□□□□□ -1.08
GARNL3-216ENST00000481242 GLDNQ6ZMI3 551 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-216ENST00000481242 C9orf62Q8N4C0 152 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 TMEM104Q8NE00 496 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 OR52L2PQ8NGH6 319 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 TMED6Q8WW62 240 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 ORAI1Q96D31 301 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 TINAGL1Q9GZM7 467 aaPredicted RBP8.32□□□□□ -1.08
GARNL3-216ENST00000481242 CHST5Q9GZS9 411 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 NXF2Q9GZY0 626 aaKnown RBP8.32□□□□□ -1.08
GARNL3-216ENST00000481242 NAA60Q9H7X0 242 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 CNTD2Q9H8S5 307 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 PIPOXQ9P0Z9 390 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 IL19Q9UHD0 177 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 FZR1Q9UM11 496 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 SLC45A2Q9UMX9 530 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 A0A1W2PPQ1 181 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 OR4C45A6NMZ5 311 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 NKX2-8O15522 239 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 SFT2D2O95562 160 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 GPANK1O95872 356 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 HAND1O96004 215 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 NQO2P16083 231 aa8.32□□□□□ -1.08
GARNL3-216ENST00000481242 CD200P41217 278 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms