RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 SIX6O95475 246 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 PTHLHP12272 177 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 OR3A1P47881 315 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 RPS16P62249 146 aaKnown RBP16.65■□□□□ 0.26
CCM2-214ENST00000481194 KLF9Q13886 244 aaPredicted RBP16.65■□□□□ 0.26
CCM2-214ENST00000481194 UNQ6494/PRO21346Q6UXR6 183 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 TCTE3Q8IZS6 198 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 ADAMTS17Q8TE56 1095 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 CCSO14618 274 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 VMA21Q3ZAQ7 101 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 HSF4Q9ULV5 492 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 A0A1W2PPV4 95 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 HRASP01112 189 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 PIGYQ3MUY2 71 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 ATPAF1Q5TC12 328 aaPredicted RBP16.64■□□□□ 0.25
CCM2-214ENST00000481194 AKR1C1Q04828 323 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 MRGPRDQ8TDS7 321 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 ASF1BQ9NVP2 202 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 SSUH2Q9Y2M2 353 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 CNIH1O95406 144 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 HBE1P02100 147 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 PI3P19957 117 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 GNB2P62879 340 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 ACOT7LQ6ZUV0 252 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 NCCRP1Q6ZVX7 275 aaPredicted RBP16.64■□□□□ 0.25
CCM2-214ENST00000481194 CORO2AQ92828 525 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 CSAG2Q9Y5P2 127 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 hCG_38984A0A1B0GV85 526 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 SMPD2O60906 423 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 B3GALT5-AS1P59052 145 aa16.64■□□□□ 0.25
CCM2-214ENST00000481194 CISD1Q9NZ45 108 aaKnown RBP16.64■□□□□ 0.25
CCM2-214ENST00000481194 M0R1X1 148 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 TNFSF12O43508 249 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 GPR157Q5UAW9 335 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 CCDC28AQ8IWP9 274 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 OR8U1Q8NH10 309 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 ZNRF4Q8WWF5 429 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 AKR1E2Q96JD6 320 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 WDR13Q9H1Z4 485 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 OR5H14A6NHG9 310 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 B9A039 149 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 SPNP16150 400 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 PLPPR2Q96GM1 343 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 OR2V2Q96R30 315 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 CNTRLQ7Z7A1 2325 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 ARID1BQ8NFD5 2236 aaPredicted RBP16.63■□□□□ 0.25
CCM2-214ENST00000481194 SHOXO15266 292 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 TMPRSS2O15393 492 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 SULT1A3P0DMM9 295 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 SULT1A4P0DMN0 295 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 PMELP40967 661 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 H3F3AP84243 136 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 TMUB2Q71RG4 321 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 LPAR5Q9H1C0 372 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 RNF150Q9ULK6 438 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 FAM96BQ9Y3D0 163 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 SSTR2P30874 369 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 PHYHD1Q5SRE7 291 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 ADAM5Q6NVV9 412 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 IGFL3Q6UXB1 125 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 COMMD5Q9GZQ3 224 aa16.63■□□□□ 0.25
CCM2-214ENST00000481194 ATP6V1G2-DDX39BF2Z307 99 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 MGST3O14880 152 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 ATXN7O15265 892 aaPredicted RBP16.62■□□□□ 0.25
CCM2-214ENST00000481194 PRDX2P32119 198 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 TLE4Q04727 773 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 SHARPINQ9H0F6 387 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 A0A0B4J2A0 478 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 C3orf85A0A1B0GTC6 90 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 ZNF705EA8MWA4 302 aaPredicted RBP16.62■□□□□ 0.25
CCM2-214ENST00000481194 DUS4LO95620 317 aaKnown RBP16.62■□□□□ 0.25
CCM2-214ENST00000481194 EFNB2P52799 333 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 BAXQ07812 192 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 COMMD7Q86VX2 200 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 OR10Z1Q8NGY1 313 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 C17orf50Q8WW18 174 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 OR5P3Q8WZ94 311 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 PPP1R3EQ9H7J1 279 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 DLL3Q9NYJ7 618 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 SHPKQ9UHJ6 478 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 ERHP84090 104 aaKnown RBP16.62■□□□□ 0.25
CCM2-214ENST00000481194 ZIC4Q8N9L1 334 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 FBXW5Q969U6 566 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 PI4KAP42356 2102 aa16.62■□□□□ 0.25
CCM2-214ENST00000481194 MDC1Q14676 2089 aaKnown RBP16.61■□□□□ 0.25
CCM2-214ENST00000481194 PCP4L1A6NKN8 68 aa16.61■□□□□ 0.25
CCM2-214ENST00000481194 K7ENP7 123 aa16.61■□□□□ 0.25
CCM2-214ENST00000481194 ADRA2AP08913 450 aa16.61■□□□□ 0.25
CCM2-214ENST00000481194 OMGP23515 440 aa16.61■□□□□ 0.25
CCM2-214ENST00000481194 IL24Q13007 206 aa16.61■□□□□ 0.25
CCM2-214ENST00000481194 GVQW1Q8N7I0 195 aa16.61■□□□□ 0.25
CCM2-214ENST00000481194 RNASE6Q93091 150 aaKnown RBP16.61■□□□□ 0.25
CCM2-214ENST00000481194 PSG11Q9UQ72 335 aa16.61■□□□□ 0.25
CCM2-214ENST00000481194 C9orf170A2RU37 121 aa16.61■□□□□ 0.25
CCM2-214ENST00000481194 ZNF79Q15937 498 aa16.61■□□□□ 0.25
CCM2-214ENST00000481194 TMEM30BQ3MIR4 351 aa16.61■□□□□ 0.25
CCM2-214ENST00000481194 GLCCI1Q86VQ1 547 aa16.61■□□□□ 0.25
CCM2-214ENST00000481194 CNTNAP3BQ96NU0 1288 aa16.61■□□□□ 0.25
CCM2-214ENST00000481194 ZNF485Q8NCK3 441 aa16.61■□□□□ 0.25
CCM2-214ENST00000481194 GCSAMQ8N6F7 178 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms