RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 HEXA-AS1Q9H8Q6 139 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 LINC00312Q9Y6C7 94 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 TENM1Q9UKZ4 2725 aa12.72□□□□□ -0.37
HMGA1-206ENST00000478214 IGHV4-59P01825 116 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 MAS1P04201 325 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 FBP1P09467 338 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 ERP29P30040 261 aaKnown RBP12.71□□□□□ -0.37
HMGA1-206ENST00000478214 MAP2K4P45985 399 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 AESQ08117 197 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 ACSM3Q53FZ2 586 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 RBM48Q5RL73 367 aaKnown RBP12.71□□□□□ -0.37
HMGA1-206ENST00000478214 C16orf87Q6PH81 154 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 UNQ9370/PRO34162Q6UXP9 181 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 PRSS48Q7RTY5 328 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 LDLRAD3Q86YD5 345 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 JAGN1Q8N5M9 183 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 MS4A15Q8N5U1 240 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 CHST4Q8NCG5 386 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 C17orf50Q8WW18 174 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 SSMEM1Q8WWF3 244 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 TAF15Q92804 592 aaKnown RBP eCLIP12.71□□□□□ -0.37
HMGA1-206ENST00000478214 ZNF714Q96N38 554 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 CHIAQ9BZP6 476 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 ING3Q9NXR8 418 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 IL36GQ9NZH8 169 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 FOXJ3Q9UPW0 622 aa12.71□□□□□ -0.37
HMGA1-206ENST00000478214 HSPB6O14558 160 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 HSMCR30P0CW71 290 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 HKR1P10072 659 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 MAPK3P27361 379 aaPredicted RBP12.7□□□□□ -0.38
HMGA1-206ENST00000478214 IER3P46695 156 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 GLIPR1P48060 266 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 GP2P55259 537 aaKnown RBP12.7□□□□□ -0.38
HMGA1-206ENST00000478214 IL13RA2Q14627 380 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 ATXN7L3Q14CW9 347 aaPredicted RBP12.7□□□□□ -0.38
HMGA1-206ENST00000478214 FAM27D1Q5T7N8 215 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 LIPKQ5VXJ0 399 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 C12orf54Q6X4T0 127 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 TMEM86BQ8N661 226 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 THRSPQ92748 146 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 UFD1Q92890 307 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 MUL1Q969V5 352 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 S100A13Q99584 98 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 ZNF581Q9P0T4 197 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 ZNRD1Q9P1U0 126 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 RRP15Q9Y3B9 282 aaKnown RBP12.7□□□□□ -0.38
HMGA1-206ENST00000478214 POMT1Q9Y6A1 747 aa12.7□□□□□ -0.38
HMGA1-206ENST00000478214 TRAV24A0A0B4J272 114 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 A0A1W2PP11 408 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 FUOMA2VDF0 154 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 FAM181BA6NEQ2 426 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 PAHP00439 452 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 RBP4P02753 201 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 CSTBP04080 98 aaKnown RBP12.69□□□□□ -0.38
HMGA1-206ENST00000478214 CSN2P05814 226 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 IGHV1-8P0DP01 117 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 SERPINA2P20848 420 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 COMPP49747 757 aaPredicted RBP12.69□□□□□ -0.38
HMGA1-206ENST00000478214 GPR50Q13585 617 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 TPBGQ13641 420 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 SLC22A6Q4U2R8 563 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 MIDNQ504T8 468 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 PAN3Q58A45 887 aaKnown RBP12.69□□□□□ -0.38
HMGA1-206ENST00000478214 TRAPPC6BQ86SZ2 158 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 LYPD6Q86Y78 171 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 OSR2Q8N2R0 312 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 TMEM203Q969S6 136 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 COQ2Q96H96 371 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 AJUBAQ96IF1 538 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 ISYNA1Q9NPH2 558 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 BLOC1S6Q9UL45 172 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 ST3GAL6Q9Y274 331 aa12.69□□□□□ -0.38
HMGA1-206ENST00000478214 MRPS28Q9Y2Q9 187 aaKnown RBP12.69□□□□□ -0.38
HMGA1-206ENST00000478214 ODAMA1E959 279 aa12.68□□□□□ -0.38
HMGA1-206ENST00000478214 SC5DO75845 299 aa12.68□□□□□ -0.38
HMGA1-206ENST00000478214 MMP23AO75900 390 aa12.68□□□□□ -0.38
HMGA1-206ENST00000478214 PAX6P26367 422 aa12.68□□□□□ -0.38
HMGA1-206ENST00000478214 RBM11P57052 281 aaKnown RBP12.68□□□□□ -0.38
HMGA1-206ENST00000478214 AWAT1Q58HT5 328 aa12.68□□□□□ -0.38
HMGA1-206ENST00000478214 NHLRC3Q5JS37 347 aa12.68□□□□□ -0.38
HMGA1-206ENST00000478214 KRBOX4Q5JUW0 171 aa12.68□□□□□ -0.38
HMGA1-206ENST00000478214 GLIPR1L1Q6UWM5 242 aa12.68□□□□□ -0.38
HMGA1-206ENST00000478214 CEACAM19Q7Z692 300 aa12.68□□□□□ -0.38
HMGA1-206ENST00000478214 CDH26Q8IXH8 852 aa12.68□□□□□ -0.38
HMGA1-206ENST00000478214 OR4D6Q8NGJ1 314 aa12.68□□□□□ -0.38
HMGA1-206ENST00000478214 OR13D1Q8NGV5 346 aa12.68□□□□□ -0.38
HMGA1-206ENST00000478214 PPIL3Q9H2H8 161 aaKnown RBP12.68□□□□□ -0.38
HMGA1-206ENST00000478214 UBE2J1Q9Y385 318 aaPredicted RBP12.68□□□□□ -0.38
HMGA1-206ENST00000478214 TRGV10A0A0A0MS01 117 aa12.67□□□□□ -0.38
HMGA1-206ENST00000478214 GEMIN2O14893 280 aaKnown RBP12.67□□□□□ -0.38
HMGA1-206ENST00000478214 ZNF780AO75290 641 aaPredicted RBP12.67□□□□□ -0.38
HMGA1-206ENST00000478214 CLPXO76031 633 aa12.67□□□□□ -0.38
HMGA1-206ENST00000478214 OR7C1O76099 320 aaPredicted RBP12.67□□□□□ -0.38
HMGA1-206ENST00000478214 RPS25P62851 125 aaKnown RBP12.67□□□□□ -0.38
HMGA1-206ENST00000478214 MLLT11Q13015 90 aaPredicted RBP12.67□□□□□ -0.38
HMGA1-206ENST00000478214 TAF9Q16594 264 aa12.67□□□□□ -0.38
HMGA1-206ENST00000478214 AWAT2Q6E213 333 aa12.67□□□□□ -0.38
HMGA1-206ENST00000478214 LHFPL4Q7Z7J7 247 aa12.67□□□□□ -0.38
HMGA1-206ENST00000478214 LRRTM1Q86UE6 522 aa12.67□□□□□ -0.38
HMGA1-206ENST00000478214 NKAIN3Q8N8D7 197 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms