RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 CGB7P0DN87 165 aa13.29□□□□□ -0.28
TRIM13-208ENST00000478111 KRTAP10-11P60412 298 aa13.29□□□□□ -0.28
TRIM13-208ENST00000478111 BNIP1Q12981 228 aa13.29□□□□□ -0.28
TRIM13-208ENST00000478111 C17orf58Q2M2W7 97 aa13.29□□□□□ -0.28
TRIM13-208ENST00000478111 HLA-DRB5Q30154 266 aa13.29□□□□□ -0.28
TRIM13-208ENST00000478111 TPTE2P1Q5T6R2 138 aa13.29□□□□□ -0.28
TRIM13-208ENST00000478111 OAZ3Q9UMX2 235 aa13.29□□□□□ -0.28
TRIM13-208ENST00000478111 FUOMA2VDF0 154 aa13.28□□□□□ -0.28
TRIM13-208ENST00000478111 SLC33A1O00400 549 aaPredicted RBP13.28□□□□□ -0.28
TRIM13-208ENST00000478111 CSN2P05814 226 aa13.28□□□□□ -0.28
TRIM13-208ENST00000478111 ZNF20P17024 532 aa13.28□□□□□ -0.28
TRIM13-208ENST00000478111 CCR9P51686 369 aa13.28□□□□□ -0.28
TRIM13-208ENST00000478111 KPNB1Q14974 876 aaKnown RBP13.28□□□□□ -0.28
TRIM13-208ENST00000478111 CDK5R1Q15078 307 aa13.28□□□□□ -0.28
TRIM13-208ENST00000478111 KCTD20Q7Z5Y7 419 aa13.28□□□□□ -0.28
TRIM13-208ENST00000478111 OR5D18Q8NGL1 313 aa13.28□□□□□ -0.28
TRIM13-208ENST00000478111 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.28□□□□□ -0.28
TRIM13-208ENST00000478111 WI2-2373I1.2A0A1W2PRP0 233 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 FAM90A18PA6NE21 464 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 FAM90A16PA6NEW6 464 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 FAM90A20PA6NIJ5 464 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 OR4C45A6NMZ5 311 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 FAM90A9PA6NNJ1 464 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 FAM90A12PA8MX19 464 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 FAM90A5PA8MXJ8 464 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 SLC16A6O15403 523 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 PF4P02776 101 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 FAM90A15PP0C7V4 464 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 FAM90A13PP0C7W8 464 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 FAM90A14PP0C7W9 464 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 FAM90A24PP0C7X0 464 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 ZNF44P15621 663 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 PTGFRP43088 359 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 SLC35A2P78381 396 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 SLC25A30Q5SVS4 291 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 SAXO1Q8IYX7 474 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 OR13C9Q8NGT0 318 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 TRUB1Q8WWH5 349 aaKnown RBP13.27□□□□□ -0.29
TRIM13-208ENST00000478111 RNFT2Q96EX2 444 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 CENPNQ96H22 339 aaPredicted RBP13.27□□□□□ -0.29
TRIM13-208ENST00000478111 RCC1LQ96I51 464 aaKnown RBP13.27□□□□□ -0.29
TRIM13-208ENST00000478111 PPIL3Q9H2H8 161 aaKnown RBP13.27□□□□□ -0.29
TRIM13-208ENST00000478111 RHOFQ9HBH0 211 aa13.27□□□□□ -0.29
TRIM13-208ENST00000478111 ZNF729A6NN14 1252 aaPredicted RBP13.26□□□□□ -0.29
TRIM13-208ENST00000478111 E9PQ18 207 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 TOR1AO14656 332 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 HTR1AP08908 422 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 FCGR1AP12314 374 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 CEACAM3P40198 252 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 ARHGDIBP52566 201 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 ZP1P60852 638 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 SCN1BQ07699 218 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 EGFEM1PQ0D2K5 195 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 KRBOX4Q5JUW0 171 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 LINC00482Q8N8I6 264 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 CHST4Q8NCG5 386 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 OR4X2Q8NGF9 303 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 OR4D6Q8NGJ1 314 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 CAPSLQ8WWF8 208 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 CREB3L1Q96BA8 519 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 PELI1Q96FA3 418 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 ING3Q9NXR8 418 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 MYRFQ9Y2G1 1151 aa13.26□□□□□ -0.29
TRIM13-208ENST00000478111 KBTBD11-OT1A0A1B0GTJ5 212 aa13.25□□□□□ -0.29
TRIM13-208ENST00000478111 DAPL1A0PJW8 107 aa13.25□□□□□ -0.29
TRIM13-208ENST00000478111 SAC3D1A6NKF1 404 aa13.25□□□□□ -0.29
TRIM13-208ENST00000478111 OOSP1A8MZH6 123 aa13.25□□□□□ -0.29
TRIM13-208ENST00000478111 OR3A4PP47883 348 aa13.25□□□□□ -0.29
TRIM13-208ENST00000478111 PRRX1P54821 245 aa13.25□□□□□ -0.29
TRIM13-208ENST00000478111 ATXN7L3Q14CW9 347 aaPredicted RBP13.25□□□□□ -0.29
TRIM13-208ENST00000478111 VAX1Q5SQQ9 334 aa13.25□□□□□ -0.29
TRIM13-208ENST00000478111 C1orf146Q5VVC0 180 aa13.25□□□□□ -0.29
TRIM13-208ENST00000478111 ETV3LQ6ZN32 361 aa13.25□□□□□ -0.29
TRIM13-208ENST00000478111 OSR2Q8N2R0 312 aa13.25□□□□□ -0.29
TRIM13-208ENST00000478111 OR13C3Q8NGS6 347 aa13.25□□□□□ -0.29
TRIM13-208ENST00000478111 KIRREL1Q96J84 757 aa13.25□□□□□ -0.29
TRIM13-208ENST00000478111 HRASLS5Q96KN8 279 aa13.25□□□□□ -0.29
TRIM13-208ENST00000478111 ZCCHC4Q9H5U6 513 aa13.25□□□□□ -0.29
TRIM13-208ENST00000478111 FAM53CQ9NYF3 392 aa13.25□□□□□ -0.29
TRIM13-208ENST00000478111 EXOGQ9Y2C4 368 aaKnown RBP13.25□□□□□ -0.29
TRIM13-208ENST00000478111 J3QLW9 94 aa13.24□□□□□ -0.29
TRIM13-208ENST00000478111 M0QZK8 103 aa13.24□□□□□ -0.29
TRIM13-208ENST00000478111 DEGS1O15121 323 aa13.24□□□□□ -0.29
TRIM13-208ENST00000478111 DUS4LO95620 317 aaKnown RBP13.24□□□□□ -0.29
TRIM13-208ENST00000478111 ZNF19P17023 458 aa13.24□□□□□ -0.29
TRIM13-208ENST00000478111 SNRPGP62308 76 aaKnown RBP13.24□□□□□ -0.29
TRIM13-208ENST00000478111 ALKBH1Q13686 389 aaKnown RBP13.24□□□□□ -0.29
TRIM13-208ENST00000478111 RBM39Q14498 530 aaKnown RBP13.24□□□□□ -0.29
TRIM13-208ENST00000478111 KISS1Q15726 138 aa13.24□□□□□ -0.29
TRIM13-208ENST00000478111 C9orf152Q5JTZ5 239 aa13.24□□□□□ -0.29
TRIM13-208ENST00000478111 C11orf87Q6NUJ2 197 aa13.24□□□□□ -0.29
TRIM13-208ENST00000478111 THNSL2Q86YJ6 484 aa13.24□□□□□ -0.29
TRIM13-208ENST00000478111 OR51T1Q8NGJ9 327 aa13.24□□□□□ -0.29
TRIM13-208ENST00000478111 OR9G1Q8NH87 305 aa13.24□□□□□ -0.29
TRIM13-208ENST00000478111 LINC00574Q9H8X3 128 aa13.24□□□□□ -0.29
TRIM13-208ENST00000478111 OR6C3Q9NZP0 311 aa13.24□□□□□ -0.29
TRIM13-208ENST00000478111 AASSQ9UDR5 926 aa13.24□□□□□ -0.29
TRIM13-208ENST00000478111 PCDHGB5Q9Y5G0 923 aa13.24□□□□□ -0.29
TRIM13-208ENST00000478111 TRAV24A0A0B4J272 114 aa13.23□□□□□ -0.29
TRIM13-208ENST00000478111 ALPLP05186 524 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms