RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 GABRR1P24046 479 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 OR3A1P47881 315 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 RAB7AP51149 207 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 EWSR1Q01844 656 aaKnown RBP eCLIP5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 MADCAM1Q13477 382 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 KPNB1Q14974 876 aaKnown RBP5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 C17orf58Q2M2W7 97 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 ZNF684Q5T5D7 378 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 LINC00336Q6ZUF6 198 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 CYP4Z1Q86W10 505 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 ANKRD13BQ86YJ7 626 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 OR2T12Q8NG77 320 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 OR52J3Q8NH60 311 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 C7orf26Q96N11 449 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 S1PR3Q99500 378 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 ELOVL1Q9BW60 279 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 NDUFAF4Q9P032 175 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 PIGLQ9Y2B2 252 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 KLK5Q9Y337 293 aaPredicted RBP5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 U3KQV3 271 aa5.57□□□□□ -1.52
SPTLC1-205ENST00000477888 SHISA3A0PJX4 238 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 H0Y980 276 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 GSC2O15499 205 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 RGS11O94810 467 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 CNIH1O95406 144 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 ZNF682O95780 498 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 LGALS1P09382 135 aaKnown RBP5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 CGB3P0DN86 165 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 CGB7P0DN87 165 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 SOX6P35712 828 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 GLIPR1P48060 266 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 BLVRAP53004 296 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 F2RL1P55085 397 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 SLX4IPQ5VYV7 408 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 IL34Q6ZMJ4 242 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 ASRGL1Q7L266 308 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 GTSCR1Q86UQ5 136 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 IZUMO1Q8IYV9 350 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 MINDY2Q8NBR6 621 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 OR4D6Q8NGJ1 314 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 OR6K6Q8NGW6 343 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 HAVCR2Q8TDQ0 301 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 KIRREL1Q96J84 757 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 CEP19Q96LK0 163 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 RASL11BQ9BPW5 248 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 CCDC134Q9H6E4 229 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 IL36RNQ9UBH0 155 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 GLS2Q9UI32 602 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 ENPP5Q9UJA9 477 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 MRPS28Q9Y2Q9 187 aaKnown RBP5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 AMMECR1Q9Y4X0 333 aaPredicted RBP5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 WSB1Q9Y6I7 421 aa5.56□□□□□ -1.52
SPTLC1-205ENST00000477888 IGHV3-72A0A0B4J1Y9 119 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 IGHV1-3A0A0C4DH29 117 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 KBTBD11-OT1A0A1B0GTJ5 212 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 DLGAP1O14490 977 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 NPPAP01160 153 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 IGHV3-7P01780 117 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 HSPB1P04792 205 aaKnown RBP5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 NFYBP25208 207 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 FASP25445 335 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 DUSP1P28562 367 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 PTGFRP43088 359 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 GSSP48637 474 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 ZNF91Q05481 1191 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 AESQ08117 197 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 MFGE8Q08431 387 aaPredicted RBP5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 ZNF816Q0VGE8 651 aaPredicted RBP5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 CRMP1Q14194 572 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 ZNF146Q15072 292 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 CLVS2Q5SYC1 327 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 SHFQ7M4L6 423 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 MOB3BQ86TA1 216 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 ERI1Q8IV48 349 aaKnown RBP5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 TMEM104Q8NE00 496 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 OR6N2Q8NGY6 317 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 OR2T10Q8NGZ9 312 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 OR51E1Q8TCB6 317 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 EDARADDQ8WWZ3 215 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 LEAP2Q969E1 77 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 FLYWCH2Q96CP2 140 aaKnown RBP5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 C7orf34Q96L11 122 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 INTS14Q96SY0 518 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 TEAD3Q99594 435 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 OVOL2Q9BRP0 275 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 EGLN3Q9H6Z9 239 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 PLEKHA3Q9HB20 300 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 GPR84Q9NQS5 396 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 GPR173Q9NS66 373 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 FAM206AQ9NX38 181 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 SIGLEC8Q9NYZ4 499 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 GMPR2Q9P2T1 348 aaKnown RBP5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 PSG11Q9UQ72 335 aa5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 FAM32AQ9Y421 112 aaKnown RBP5.55□□□□□ -1.52
SPTLC1-205ENST00000477888 IGKV1-27A0A075B6S5 117 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 ODAMA1E959 279 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 ACOD1A6NK06 481 aa5.54□□□□□ -1.52
SPTLC1-205ENST00000477888 ZNF729A6NN14 1252 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms