RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	ZCCHC24	Q8N2G6	241 aa	Known RBP	2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	TMEM105	Q8N8V8	129 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	SLC26A10	Q8NG04	563 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	OR4K2	Q8NGD2	314 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	OR6K3	Q8NGY3	331 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	ZNF420	Q8TAQ5	688 aa	Predicted RBP	2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	CASTOR1	Q8WTX7	329 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	ORAOV1	Q8WV07	137 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	TMEM56	Q96MV1	263 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	FAAP24	Q9BTP7	215 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	SLC25A31	Q9H0C2	315 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	METTL9	Q9H1A3	318 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	PARP11	Q9NR21	331 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	SPANXB1	Q9NS25	103 aa	Predicted RBP	2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	FGFR1OP2	Q9NVK5	253 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	PLEKHJ1	Q9NW61	149 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	C21orf62	Q9NYP8	219 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	INSIG2	Q9Y5U4	225 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	ZNF780B	Q9Y6R6	833 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	BRD4	O60885	1362 aa	Predicted RBP	2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	ADAMTSL3	P82987	1691 aa		2.18	□□□□□ -2.06
RBM39-231	ENST00000477334	NRCAM	Q92823	1304 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	IGHV3-72	A0A0B4J1Y9	119 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	LOC389332	A0A1B0GUA5	103 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	DAPL1	A0PJW8	107 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	ZNF233	A6NK53	670 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	SLC16A4	O15374	487 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	ATP8B1	O43520	1251 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	SYNGR1	O43759	233 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	COX7A2P2	O60397	106 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	IGKV5-2	P06315	115 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	SLC2A1	P11166	492 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	SPN	P16150	400 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	HIST1H1C	P16403	213 aa	Known RBP	2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	AKR1C4	P17516	323 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	PRTN3	P24158	256 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	IL3RA	P26951	378 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	NUDT2	P50583	147 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	CEBPG	P53567	150 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	PRDX1	Q06830	199 aa	Known RBP	2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	UAP1	Q16222	522 aa	Predicted RBP	2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	SLC36A2	Q495M3	483 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	TTMP	Q5BVD1	217 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	MED27	Q6P2C8	311 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	FAM231D	Q6ZW35	169 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	DCXR	Q7Z4W1	244 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	TMEM251	Q8N6I4	163 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	ZNF565	Q8N9K5	539 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	OR5T1	Q8NG75	326 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	ERMN	Q8TAM6	284 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	CPNE4	Q96A23	557 aa	Predicted RBP	2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	WDR34	Q96EX3	536 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	KCNS1	Q96KK3	526 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	ANAPC13	Q9BS18	74 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	NUDT9	Q9BW91	350 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	DHX35	Q9H5Z1	703 aa	Known RBP	2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	LRRC42	Q9Y546	428 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	ADCY9	O60503	1353 aa		2.17	□□□□□ -2.06
RBM39-231	ENST00000477334	BRCA1	P38398	1863 aa	Known RBP	2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	RAB3GAP2	Q9H2M9	1393 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	IGHV6-1	A0A0B4J1U7	121 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	TRAV8-2	A0A0B4J237	113 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	BTNL10	A8MVZ5	291 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	LRRN3	E7EW58	273 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334		F5H5K5	113 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	CCRL2	O00421	344 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	GPR171	O14626	319 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	RGS5	O15539	181 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	SSNA1	O43805	119 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	STX10	O60499	249 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	OR2A4	O95047	310 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	CYB5R3	P00387	301 aa	Predicted RBP	2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	SCGB1C2	P0DMR2	95 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	COX5B	P10606	129 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	TSPO	P30536	169 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	ACTR1B	P42025	376 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	RPL14	P50914	215 aa	Known RBP	2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	AP2S1	P53680	142 aa	Predicted RBP	2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	CLEC12A	Q5QGZ9	265 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	TIMM23B	Q5SRD1	257 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	ZNF773	Q6PK81	442 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	CCDC112	Q8NEF3	446 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	OR5L1	Q8NGL2	311 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	OR5M1	Q8NGP8	315 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	OR1L1	Q8NH94	360 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	SCGB1C1	Q8TD33	95 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	DTD1	Q8TEA8	209 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	SMIM12	Q96EX1	92 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	CHMP6	Q96FZ7	201 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	FMC1	Q96HJ9	113 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	RBP7	Q96R05	134 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	OR2A7	Q96R45	310 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	GPR22	Q99680	433 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	DHRS9	Q9BPW9	319 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	TMEM208	Q9BTX3	173 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	SUCNR1	Q9BXA5	334 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	UGT2B28	Q9BY64	529 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	TSGA10	Q9BZW7	698 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	MFSD1	Q9H3U5	465 aa		2.16	□□□□□ -2.06
RBM39-231	ENST00000477334	UCK1	Q9HA47	277 aa		2.16	□□□□□ -2.06

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