RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 GVQW1Q8N7I0 195 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 SEC11CQ9BY50 192 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 SLC17A5Q9NRA2 495 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 SIGLEC14Q08ET2 396 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 OR10A7Q8NGE5 316 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 RASL10BQ96S79 203 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 MPC1Q9Y5U8 109 aa16.41■□□□□ 0.22
VARS2-209ENST00000477288 RAC3P60763 192 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 ASB10Q8WXI3 467 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 ZNF275Q9NSD4 429 aaPredicted RBP16.4■□□□□ 0.22
VARS2-209ENST00000477288 ZFPL1O95159 310 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 PEX11BO96011 259 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 GP1BAP07359 652 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 CTGFP29279 349 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 DRD3P35462 400 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 TBC1D26Q86UD7 250 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 ASCL3Q9NQ33 180 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 RPL29P47914 159 aaKnown RBP16.4■□□□□ 0.22
VARS2-209ENST00000477288 SULT1A2P50226 295 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 GPR27Q9NS67 375 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 HELTA6NFD8 242 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 MELTFP08582 738 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 SLC35B3Q9H1N7 401 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 PAPPAQ13219 1627 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 PAPPA2Q9BXP8 1791 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 CTLA4P16410 223 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 ZG16BQ96DA0 208 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 FAM210BQ96KR6 192 aa16.4■□□□□ 0.22
VARS2-209ENST00000477288 PATE3B3GLJ2 98 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 POLR2GP62487 172 aaKnown RBP eCLIP16.39■□□□□ 0.21
VARS2-209ENST00000477288 PSG5Q15238 335 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 ZBTB37Q5TC79 503 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 PTP4A1Q93096 173 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 BCORQ6W2J9 1755 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 SNRPEP62304 92 aaKnown RBP16.39■□□□□ 0.21
VARS2-209ENST00000477288 HLXQ14774 488 aaPredicted RBP16.39■□□□□ 0.21
VARS2-209ENST00000477288 MOGAT1Q96PD6 335 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 ZNF426Q9BUY5 554 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 ECM29Q5VYK3 1845 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 IGLV3-16A0A075B6K0 115 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 SEMA7AO75326 666 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 HAND1O96004 215 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 ECSCRQ19T08 205 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 WDR73Q6P4I2 378 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 OR5A2Q8NGI9 324 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 NUP205Q92621 2012 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 ZP3P21754 424 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 OR8B12Q8NGG6 310 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 OR4P4Q8NGL7 312 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 PIK3IP1Q96FE7 263 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 TECRQ9NZ01 308 aaKnown RBP16.39■□□□□ 0.21
VARS2-209ENST00000477288 C1RLQ9NZP8 487 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 DOCK2Q92608 1830 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 FXYD1O00168 92 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 NAAAQ02083 359 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 IL13RA2Q14627 380 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 Q6ZN92 141 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 ZNF441Q8N8Z8 693 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 OR6X1Q8NH79 312 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 VSTM2LQ96N03 204 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 LIPGQ9Y5X9 500 aa16.39■□□□□ 0.21
VARS2-209ENST00000477288 C21orf140B9A014 251 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 MFNGO00587 321 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 HPXP02790 462 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 RPL24P83731 157 aaKnown RBP16.38■□□□□ 0.21
VARS2-209ENST00000477288 TSPO2Q5TGU0 170 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 SH2D5Q6ZV89 423 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 VSTM2AQ8TAG5 236 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 SSMEM1Q8WWF3 244 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 ADTRPQ96IZ2 230 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 RNF7Q9UBF6 113 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 FBXL17Q9UF56 701 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 TINAGQ9UJW2 476 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 CRISP2P16562 243 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 COL13A1Q5TAT6 717 aaPredicted RBP16.38■□□□□ 0.21
VARS2-209ENST00000477288 WDR74Q6RFH5 385 aaPredicted RBP16.38■□□□□ 0.21
VARS2-209ENST00000477288 TMEM171Q8WVE6 324 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 HEXA-AS1Q9H8Q6 139 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 NTMQ9P121 344 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 TRAV20A0A0B4J274 112 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 P01737 135 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 LIMS2Q7Z4I7 341 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 VN1R4Q7Z5H5 301 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 ZNF385DQ9H6B1 395 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 SIRT5Q9NXA8 310 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 DEGS2Q6QHC5 323 aa16.38■□□□□ 0.21
VARS2-209ENST00000477288 IGHV3OR15-7A0A075B7D8 119 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 IGHV3-21A0A0B4J1V1 117 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 OOEPA6NGQ2 149 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 DLX1P56177 255 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 WDR13Q9H1Z4 485 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 SRSF9Q13242 221 aaKnown RBP eCLIP16.37■□□□□ 0.217e-11■■□□□ 13.7
VARS2-209ENST00000477288 ATP6V1FQ16864 119 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 ANKRD55Q3KP44 614 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 CDIPTO14735 213 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 ZNF841Q6ZN19 808 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 NUBPLQ8TB37 319 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 TMEM167BQ9NRX6 74 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 MTFP1Q9UDX5 166 aa16.37■□□□□ 0.21
VARS2-209ENST00000477288 RREB1Q92766 1687 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms