RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 LRRTM1Q86UE6 522 aa7.96□□□□□ -1.14
HDAC3-208ENST00000476739 FAM185AQ8N0U4 392 aa7.96□□□□□ -1.14
HDAC3-208ENST00000476739 SPARTQ8N0X7 666 aa7.96□□□□□ -1.14
HDAC3-208ENST00000476739 OR8H2Q8N162 312 aa7.96□□□□□ -1.14
HDAC3-208ENST00000476739 C11orf42Q8N5U0 333 aa7.96□□□□□ -1.14
HDAC3-208ENST00000476739 MS4A15Q8N5U1 240 aa7.96□□□□□ -1.14
HDAC3-208ENST00000476739 TEX29Q8N6K0 151 aa7.96□□□□□ -1.14
HDAC3-208ENST00000476739 LHX4Q969G2 390 aa7.96□□□□□ -1.14
HDAC3-208ENST00000476739 MUL1Q969V5 352 aa7.96□□□□□ -1.14
HDAC3-208ENST00000476739 SNX22Q96L94 193 aa7.96□□□□□ -1.14
HDAC3-208ENST00000476739 FAM234AQ9H0X4 552 aa7.96□□□□□ -1.14
HDAC3-208ENST00000476739 ISYNA1Q9NPH2 558 aa7.96□□□□□ -1.14
HDAC3-208ENST00000476739 CKLFQ9UBR5 152 aa7.96□□□□□ -1.14
HDAC3-208ENST00000476739 RABL2BQ9UNT1 228 aa7.96□□□□□ -1.14
HDAC3-208ENST00000476739 KPTNQ9Y664 436 aa7.96□□□□□ -1.14
HDAC3-208ENST00000476739 A0A0G2JK05 382 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 NOTOA8MTQ0 251 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 SLC33A1O00400 549 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-208ENST00000476739 SH2D1BO14796 132 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 TCF21O43680 179 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 HTR3BO95264 441 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 SERPINA2P20848 420 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 GABRR1P24046 479 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 LMO1P25800 156 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 MTNR1BP49286 362 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 EDDM3BP56851 147 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 RPL31P62899 125 aaKnown RBP7.95□□□□□ -1.14
HDAC3-208ENST00000476739 FABP5Q01469 135 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 EDDM3AQ14507 147 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 RSU1Q15404 277 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 GRK1Q15835 563 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 KRTAP24-1Q3LI83 254 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 HCP5Q6MZN7 132 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 FIP1L1Q6UN15 594 aaKnown RBP7.95□□□□□ -1.14
HDAC3-208ENST00000476739 ZNF367Q7RTV3 350 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 PNKDQ8N490 385 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 JAGN1Q8N5M9 183 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 SIGLECL1Q8N7X8 197 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 Q8NFD4 153 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 OR4D6Q8NGJ1 314 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 SUN5Q8TC36 379 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 TNFRSF14Q92956 283 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 CYYR1Q96J86 154 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 C1orf147Q96MC9 270 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-208ENST00000476739 GFI1Q99684 422 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 BCL7BQ9BQE9 202 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 MS4A7Q9GZW8 240 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-208ENST00000476739 PPA2Q9H2U2 334 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 SEBOXQ9HB31 216 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-208ENST00000476739 EXOSC4Q9NPD3 245 aaKnown RBP7.95□□□□□ -1.14
HDAC3-208ENST00000476739 ESM1Q9NQ30 184 aa7.95□□□□□ -1.14
HDAC3-208ENST00000476739 MXRA5Q9NR99 2828 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 TRBV23-1A0A0A0MS06 115 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 TRAV24A0A0B4J272 114 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 A0A1W2PRD5 423 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 A0A1W2PRF3 423 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 A0A1W2PRM7 423 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 RNASEK-C17orf49H0YIS7 233 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 M0R1W7 72 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 DEGS1O15121 323 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 MRPS14O60783 128 aaKnown RBP7.94□□□□□ -1.14
HDAC3-208ENST00000476739 UCHL1P09936 223 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 ZNF44P15621 663 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 SRMP19623 302 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 MAPK3P27361 379 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-208ENST00000476739 TMBIM6P55061 237 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 DLX6P56179 175 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 HILS1P60008 231 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 SLC22A6Q4U2R8 563 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 HSD17B12Q53GQ0 312 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 GPR157Q5UAW9 335 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 UBE2UQ5VVX9 321 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 SIGIRRQ6IA17 410 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 GLIPR1L1Q6UWM5 242 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 C9orf139Q6ZV77 190 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 BPIFB2Q8N4F0 458 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 PIP4P2Q8N4L2 257 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 KIR3DL3Q8N743 410 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 ZDHHC22Q8N966 263 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 OR51T1Q8NGJ9 327 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 GRPEL2Q8TAA5 225 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 CHAC2Q8WUX2 184 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 CPNE2Q96FN4 548 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-208ENST00000476739 DMRTB1Q96MA1 342 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 METTL9Q9H1A3 318 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 RHOFQ9HBH0 211 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 ING3Q9NXR8 418 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 IL36GQ9NZH8 169 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 ST3GAL6Q9Y274 331 aa7.94□□□□□ -1.14
HDAC3-208ENST00000476739 IGHV1-69DA0A0B4J2H0 117 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 SHISA3A0PJX4 238 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 ANKRD34BA5PLL1 514 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 HSPB6O14558 160 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 GEMIN2O14893 280 aaKnown RBP7.93□□□□□ -1.14
HDAC3-208ENST00000476739 IGHV1-69P01742 117 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 FPR2P25090 351 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 GABRA5P31644 462 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 GLIPR1P48060 266 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 AESQ08117 197 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 ATXN7L3Q14CW9 347 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms