RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 SLC9A3R2Q15599 337 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 TSC22D1Q15714 1073 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 NKAIN1Q4KMZ8 207 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 PHYHD1Q5SRE7 291 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 DNLZQ5SXM8 178 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 SPSB3Q6PJ21 355 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 SHISA2Q6UWI4 295 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 Q6ZPA2 131 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 FAM57BQ71RH2 274 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 CPEB2Q7Z5Q1 589 aaKnown RBP5.92□□□□□ -1.46
UBR4-212ENST00000475973 ODF3L1Q8IXM7 274 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 C20orf196Q8IYI0 205 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 OR51T1Q8NGJ9 327 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 OR8U1Q8NH10 309 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 CPT1CQ8TCG5 803 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 MRPL24Q96A35 216 aaKnown RBP5.92□□□□□ -1.46
UBR4-212ENST00000475973 SPSB4Q96A44 273 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 MOB3AQ96BX8 217 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 SPACA9Q96E40 222 aaPredicted RBP5.92□□□□□ -1.46
UBR4-212ENST00000475973 DNAJA3Q96EY1 480 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 IMMP1LQ96LU5 166 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 FER1L6-AS2Q96M78 137 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 TMEM56Q96MV1 263 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 SPACA5Q96QH8 159 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 SF3B5Q9BWJ5 86 aaKnown RBP5.92□□□□□ -1.46
UBR4-212ENST00000475973 NAA60Q9H7X0 242 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 TREM1Q9NP99 234 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 FAM212BQ9NTI7 297 aaPredicted RBP5.92□□□□□ -1.46
UBR4-212ENST00000475973 PRR13Q9NZ81 148 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 EHFQ9NZC4 300 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 ATPIF1Q9UII2 106 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 TMEM56-RWDD3S4R434 201 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 AHCTF1Q8WYP5 2266 aa5.92□□□□□ -1.46
UBR4-212ENST00000475973 IGKV1-27A0A075B6S5 117 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 LOC100509620A0A075B734 347 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 A0A087WWC5 75 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 TRAV1-1A0A0B4J248 108 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 IGHV3-20A0A0C4DH32 117 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 DUXBA0A1W2PPF3 345 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 C7orf77A4D0Y5 90 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 ZNF732B4DXR9 585 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 SDCBPO00560 298 aaPredicted RBP5.91□□□□□ -1.46
UBR4-212ENST00000475973 DHHO43323 396 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 GMFGO60234 142 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 ZIC3O60481 467 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 MED6O75586 246 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 TUSC2O75896 110 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 CDS2O95674 445 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 SERPINA5P05154 406 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 CST2P09228 141 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 PI3P19957 117 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 KLK2P20151 261 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 CD80P33681 288 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 RBMXP38159 391 aaKnown RBP5.91□□□□□ -1.46
UBR4-212ENST00000475973 ZNF41P51814 821 aaPredicted RBP5.91□□□□□ -1.46
UBR4-212ENST00000475973 B3GALT5-AS1P59052 145 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 RAB5BP61020 215 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 CSNK2A1P68400 391 aaPredicted RBP5.91□□□□□ -1.46
UBR4-212ENST00000475973 ARFRP1Q13795 201 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 SSPNQ14714 243 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 PCOLCEQ15113 449 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 IGFBP7Q16270 282 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 NRN1LQ496H8 165 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 C1orf189Q5VU69 101 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 TMEM211Q6ICI0 200 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 PLXDC2Q6UX71 529 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 Q6ZRG5 221 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 COLCA1Q6ZS62 124 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 SGPP2Q8IWX5 399 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 TMEM156Q8N614 296 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 LFNGQ8NES3 379 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 CSNK2A3Q8NEV1 391 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 OR10G3Q8NGC4 313 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 OR10G4Q8NGN3 311 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 OR2Y1Q8NGV0 311 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 FNDC9Q8TBE3 224 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 GTF3AQ92664 365 aaKnown RBP5.91□□□□□ -1.46
UBR4-212ENST00000475973 BSCL2Q96G97 398 aaPredicted RBP5.91□□□□□ -1.46
UBR4-212ENST00000475973 FAM71F1Q96KD3 344 aaPredicted RBP5.91□□□□□ -1.46
UBR4-212ENST00000475973 RASL10BQ96S79 203 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 SULT4A1Q9BR01 284 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 ZNF2Q9BSG1 426 aaPredicted RBP5.91□□□□□ -1.46
UBR4-212ENST00000475973 NAA11Q9BSU3 229 aaPredicted RBP5.91□□□□□ -1.46
UBR4-212ENST00000475973 HRH4Q9H3N8 390 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 TMEM231Q9H6L2 316 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 METTL8Q9H825 291 aaKnown RBP5.91□□□□□ -1.46
UBR4-212ENST00000475973 WDR54Q9H977 334 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 AKIRIN1Q9H9L7 192 aaPredicted RBP5.91□□□□□ -1.46
UBR4-212ENST00000475973 NXT1Q9UKK6 140 aaKnown RBP5.91□□□□□ -1.46
UBR4-212ENST00000475973 C14orf166Q9Y224 244 aaKnown RBP5.91□□□□□ -1.46
UBR4-212ENST00000475973 VDAC3Q9Y277 283 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 TMED3Q9Y3Q3 217 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 SDK2Q58EX2 2172 aa5.91□□□□□ -1.46
UBR4-212ENST00000475973 ASH1LQ9NR48 2969 aaKnown RBP5.91□□□□□ -1.46
UBR4-212ENST00000475973 NCOA6Q14686 2063 aaPredicted RBP5.9□□□□□ -1.46
UBR4-212ENST00000475973 TRBV6-6A0A0A6YYG2 114 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 IGKV1-12A0A0C4DH73 117 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 TRBV11-1A0A0K0K1C0 115 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 BTBD17A6NE02 478 aa5.9□□□□□ -1.46
UBR4-212ENST00000475973 KIAA1324LA8MWY0 1029 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms