RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 PRDM13Q9H4Q3 707 aa11.85□□□□□ -0.51
ABCF3-211ENST00000475728 MRPS28Q9Y2Q9 187 aaKnown RBP11.85□□□□□ -0.51
ABCF3-211ENST00000475728 FAM96BQ9Y3D0 163 aa11.85□□□□□ -0.51
ABCF3-211ENST00000475728 TRGV10A0A0A0MS01 117 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 A0A0G2JK05 382 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 H3BUI4 141 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 CLDN34H7C241 214 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 CDRT1O95170 752 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 UCHL1P09936 223 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 RANBP1P43487 201 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 MAP2K4P45985 399 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 ZNF273Q14593 569 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 DEFB112Q30KQ8 113 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 RUSC1-AS1Q66K80 236 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 GLT8D1Q68CQ7 371 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 OR10K1Q8NGX5 313 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 FCGR1BQ92637 280 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 TNFRSF14Q92956 283 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 SLC25A28Q96A46 364 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 ZNF714Q96N38 554 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 C19orf24Q9BVV8 132 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 ACOT13Q9NPJ3 140 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 GHRLQ9UBU3 117 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 ST3GAL6Q9Y274 331 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 UBE2J1Q9Y385 318 aaPredicted RBP11.84□□□□□ -0.51
ABCF3-211ENST00000475728 LRRC42Q9Y546 428 aa11.84□□□□□ -0.51
ABCF3-211ENST00000475728 DNAJC9-AS1A6NH13 148 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 C17orf98A8MV24 154 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 RNASEK-C17orf49H0YIS7 233 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 SLC33A1O00400 549 aaPredicted RBP11.83□□□□□ -0.52
ABCF3-211ENST00000475728 NPFFO15130 113 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 SC5DO75845 299 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 PAHP00439 452 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 FBP1P09467 338 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 UBBP0CG47 229 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 SERPINA2P20848 420 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 GABRA5P31644 462 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 RBM11P57052 281 aaKnown RBP11.83□□□□□ -0.52
ABCF3-211ENST00000475728 UBA52P62987 128 aaKnown RBP11.83□□□□□ -0.52
ABCF3-211ENST00000475728 MPV17LQ2QL34 196 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 SLC22A6Q4U2R8 563 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 MIDNQ504T8 468 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 PAN3Q58A45 887 aaKnown RBP11.83□□□□□ -0.52
ABCF3-211ENST00000475728 AWAT2Q6E213 333 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 GLIPR1L1Q6UWM5 242 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 TRAPPC6BQ86SZ2 158 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 PDZD9Q8IXQ8 264 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 TMEM86BQ8N661 226 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 ZDHHC22Q8N966 263 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 TMEM203Q969S6 136 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 MUL1Q969V5 352 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 ZNF48Q96MX3 618 aaPredicted RBP11.83□□□□□ -0.52
ABCF3-211ENST00000475728 BARHL1Q9BZE3 327 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 PPA2Q9H2U2 334 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 GAL3ST2Q9H3Q3 398 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 IFT22Q9H7X7 185 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 SPACA1Q9HBV2 294 aa11.83□□□□□ -0.52
ABCF3-211ENST00000475728 MAGEA13PA6NCF6 341 aa11.82□□□□□ -0.52
ABCF3-211ENST00000475728 RRP9O43818 475 aaKnown RBP11.82□□□□□ -0.52
ABCF3-211ENST00000475728 OR7C1O76099 320 aaPredicted RBP11.82□□□□□ -0.52
ABCF3-211ENST00000475728 CCL3L1P16619 93 aa11.82□□□□□ -0.52
ABCF3-211ENST00000475728 SRMP19623 302 aa11.82□□□□□ -0.52
ABCF3-211ENST00000475728 DLX6P56179 175 aa11.82□□□□□ -0.52
ABCF3-211ENST00000475728 SRSF2Q01130 221 aaKnown RBP11.82□□□□□ -0.52
ABCF3-211ENST00000475728 EMX1Q04741 257 aaPredicted RBP11.82□□□□□ -0.52
ABCF3-211ENST00000475728 PIGYQ3MUY2 71 aa11.82□□□□□ -0.52
ABCF3-211ENST00000475728 KRBOX4Q5JUW0 171 aa11.82□□□□□ -0.52
ABCF3-211ENST00000475728 Q6YL49 198 aa11.82□□□□□ -0.52
ABCF3-211ENST00000475728 OR13D1Q8NGV5 346 aa11.82□□□□□ -0.52
ABCF3-211ENST00000475728 SSMEM1Q8WWF3 244 aa11.82□□□□□ -0.52
ABCF3-211ENST00000475728 NCOR1P1Q9H4R4 102 aa11.82□□□□□ -0.52
ABCF3-211ENST00000475728 ESM1Q9NQ30 184 aa11.82□□□□□ -0.52
ABCF3-211ENST00000475728 TAS2R3Q9NYW6 316 aa11.82□□□□□ -0.52
ABCF3-211ENST00000475728 OR6C3Q9NZP0 311 aa11.82□□□□□ -0.52
ABCF3-211ENST00000475728 POMT1Q9Y6A1 747 aa11.82□□□□□ -0.52
ABCF3-211ENST00000475728 A0A0U1RQK1 487 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 ODAMA1E959 279 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 MEIOCA2RUB1 952 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 RNASE1P07998 156 aaKnown RBP11.81□□□□□ -0.52
ABCF3-211ENST00000475728 LGALS4P56470 323 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 RPS25P62851 125 aaKnown RBP11.81□□□□□ -0.52
ABCF3-211ENST00000475728 ACTG1P63261 375 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 PAX5Q02548 391 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 KLRD1Q13241 179 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 INSL4Q14641 139 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 FAM27D1Q5T7N8 215 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 OR52W1Q6IF63 320 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 ZNF773Q6PK81 442 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 LDLRAD3Q86YD5 345 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 PIP4P2Q8N4L2 257 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 C11orf42Q8N5U0 333 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 CORO2AQ92828 525 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 NKX3-1Q99801 234 aaPredicted RBP11.81□□□□□ -0.52
ABCF3-211ENST00000475728 CST11Q9H112 138 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 DPAGT1Q9H3H5 408 aa11.81□□□□□ -0.52
ABCF3-211ENST00000475728 CUBNO60494 3623 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 TRAV24A0A0B4J272 114 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 FAM90A10PA6NDY2 464 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 BTBD17A6NE02 478 aa11.8□□□□□ -0.52
ABCF3-211ENST00000475728 FAM90A18PA6NE21 464 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms