RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 HSD17B10Q99714 261 aaKnown RBP10.24□□□□□ -0.77
U2AF1-209ENST00000475639 ZNF426Q9BUY5 554 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 H3BVH4 76 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 SIAH2O43255 324 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 HIST1H1BP16401 226 aaKnown RBP10.24□□□□□ -0.77
U2AF1-209ENST00000475639 DDTP30046 118 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 GUCA2AQ02747 115 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 OR1C1Q15619 314 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 ANKRD55Q3KP44 614 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 SLC35E4Q6ICL7 350 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 TAS1R1Q7RTX1 841 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 OR1L1Q8NH94 360 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 ZG16BQ96DA0 208 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 ZDHHC5Q9C0B5 715 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 TXNIPQ9H3M7 391 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 CLEC5AQ9NY25 188 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 TMED3Q9Y3Q3 217 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 A0A1W2PN81 502 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 F8VVB4 439 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 F8VWA3 439 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 ST6GAL1P15907 406 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 CD1BP29016 333 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 CHRNA7P36544 502 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 MIDNQ504T8 468 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 OSR2Q8N2R0 312 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 SLC35B3Q9H1N7 401 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 ZNF552Q9H707 407 aaPredicted RBP10.24□□□□□ -0.77
U2AF1-209ENST00000475639 MSL2Q9HCI7 577 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 TMEM9BQ9NQ34 198 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.24□□□□□ -0.77
U2AF1-209ENST00000475639 MAP1LC3B2A6NCE7 125 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 FAM157AC9JC47 383 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 KLF7O75840 302 aaPredicted RBP10.24□□□□□ -0.77
U2AF1-209ENST00000475639 CSN3P07498 182 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 FUT3P21217 361 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 EGR3Q06889 387 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 PNLIPRP3Q17RR3 467 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 CST9Q5W186 159 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 FAM24BQ8N5W8 94 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 PP6455Q8WZ26 134 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 ST8SIA1Q92185 356 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 THOC3Q96J01 351 aaKnown RBP10.24□□□□□ -0.77
U2AF1-209ENST00000475639 C2orf88Q9BSF0 95 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 MAP1LC3BQ9GZQ8 125 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 DUSP15Q9H1R2 295 aaPredicted RBP10.24□□□□□ -0.77
U2AF1-209ENST00000475639 LYRM4Q9HD34 91 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 HCFC1R1Q9NWW0 138 aa10.24□□□□□ -0.77
U2AF1-209ENST00000475639 POLEQ07864 2286 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 ABCA4P78363 2273 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 ANAPC1Q9H1A4 1944 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 DHHO43323 396 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 NDUFB3O43676 98 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 HOXA5P20719 270 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 DUSP5Q16690 384 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 FNDC7Q5VTL7 733 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 ABLIM2Q6H8Q1 611 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 MRM1Q6IN84 353 aaKnown RBP10.23□□□□□ -0.77
U2AF1-209ENST00000475639 MYPOPQ86VE0 399 aaPredicted RBP10.23□□□□□ -0.77
U2AF1-209ENST00000475639 RAB24Q969Q5 203 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 C19orf53Q9UNZ5 99 aaPredicted RBP10.23□□□□□ -0.77
U2AF1-209ENST00000475639 OR51B4Q9Y5P0 310 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 A0A087X0M5 115 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 A0A1B0GX30 115 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 FBLL1A6NHQ2 334 aaKnown RBP10.23□□□□□ -0.77
U2AF1-209ENST00000475639 MS4A18H0YCH9 400 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 TMEM189-UBE2V1I3L0A0 370 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 MBTPS2O43462 519 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 NUDT3O95989 172 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 OPN1MWP04001 364 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 OPN1MW2P0DN77 364 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 OPN1MW3P0DN78 364 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 DAOP14920 347 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 CEBPBP17676 345 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 MS4A18Q3C1V0 323 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 UNQ9370/PRO34162Q6UXP9 181 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 ETFBKMTQ8IXQ9 262 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 LILRA3Q8N6C8 439 aaPredicted RBP10.23□□□□□ -0.77
U2AF1-209ENST00000475639 SDF2Q99470 211 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 TEX101Q9BY14 249 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 NAGKQ9UJ70 344 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 RCL1Q9Y2P8 373 aaKnown RBP10.23□□□□□ -0.77
U2AF1-209ENST00000475639 UFC1Q9Y3C8 167 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 DENND4CQ5VZ89 1909 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 CXCL13O43927 109 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 ONECUT2O95948 504 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 BCL3P20749 454 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 ZNF816Q0VGE8 651 aaPredicted RBP10.23□□□□□ -0.77
U2AF1-209ENST00000475639 LRRC10Q5BKY1 277 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 OR2T10Q8NGZ9 312 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 OR4C12Q96R67 309 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 IL36GQ9NZH8 169 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 LPAR3Q9UBY5 353 aa10.23□□□□□ -0.77
U2AF1-209ENST00000475639 SLC22A20A6NK97 555 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 CD5P06127 495 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 CD82P27701 267 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 OPRK1P41145 380 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 ZNF141Q15928 474 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 C6orf201Q7Z4U5 140 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 OR52L2PQ8NGH6 319 aa10.22□□□□□ -0.77
U2AF1-209ENST00000475639 GAL3ST2Q9H3Q3 398 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms