RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 CD1BP29016 333 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 CDC42P60953 191 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 ZNF684Q5T5D7 378 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 PLCXD3Q63HM9 321 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 FAM53AQ6NSI3 398 aaPredicted RBP6.03□□□□□ -1.44
USP54-211ENST00000474929 ZNF730Q6ZMV8 503 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 MBOAT2Q6ZWT7 520 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 ANGPTL5Q86XS5 388 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 MSRB3Q8IXL7 192 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 POM121L12Q8N7R1 296 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 MINDY2Q8NBR6 621 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 OR10X1Q8NGY0 326 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 ZNF488Q96MN9 340 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 MBOAT4Q96T53 435 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 FNDC11Q9BVV2 318 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 TMEM120AQ9BXJ8 343 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 C11orf68Q9H3H3 251 aaKnown RBP6.03□□□□□ -1.44
USP54-211ENST00000474929 EGLN3Q9H6Z9 239 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 MRPL22Q9NWU5 206 aaKnown RBP6.03□□□□□ -1.44
USP54-211ENST00000474929 VAPAQ9P0L0 249 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 RNF150Q9ULK6 438 aa6.03□□□□□ -1.44
USP54-211ENST00000474929 TRBV5-3A0A0A0MS03 114 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 IGHV1-3A0A0C4DH29 117 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 A0A1W2PN81 502 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 CDC42EP2O14613 210 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 ARPC3O15145 178 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 ATP6V0E1O15342 81 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 OR2A4O95047 310 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 CD7P09564 240 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 IL3RAP26951 378 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 CHRNA7P36544 502 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 MRPL19P49406 292 aaKnown RBP6.02□□□□□ -1.45
USP54-211ENST00000474929 BLVRAP53004 296 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 ZNF121P58317 390 aaPredicted RBP6.02□□□□□ -1.45
USP54-211ENST00000474929 ERVK11-1P61568 191 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 IL24Q13007 206 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 KLF5Q13887 457 aaPredicted RBP6.02□□□□□ -1.45
USP54-211ENST00000474929 CEP78Q5JTW2 689 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 METTL21CQ5VZV1 264 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 PVRIGQ6DKI7 326 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 CGB2Q6NT52 195 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 FAHD1Q6P587 224 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 SLC16A12Q6ZSM3 486 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 PRSS45Q7RTY3 260 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 MOB3BQ86TA1 216 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 Q8IYB0 196 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 RDH10Q8IZV5 341 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 CENPSQ8N2Z9 138 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 TPRX1Q8N7U7 411 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 YIPF7Q8N8F6 280 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 PROKR2Q8NFJ6 384 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 OR2T4Q8NH00 348 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 DYNLRB2Q8TF09 96 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 FRZBQ92765 325 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 NMNAT3Q96T66 252 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 PKIBQ9C010 78 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 ANKRD19PQ9H560 264 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 MED4Q9NPJ6 270 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 PARP11Q9NR21 331 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 RHCGQ9UBD6 479 aa6.02□□□□□ -1.45
USP54-211ENST00000474929 KIR2DL5BA0A0G2JN68 375 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 KIR2DL5BA0A0G2JPC4 375 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 LGALS9O00182 355 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 ANGPT2O15123 496 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 IDH3BO43837 385 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 HAND1O96004 215 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 HLA-DRB1P01911 266 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 NFYBP25208 207 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 GYS2P54840 703 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 TMEM267Q0VDI3 215 aaPredicted RBP6.01□□□□□ -1.45
USP54-211ENST00000474929 BNIP1Q12981 228 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 DEFB135Q30KP9 77 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 ANKRD55Q3KP44 614 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 TEX30Q5JUR7 227 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 C1orf134Q5TEV5 83 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 DLEU7Q6UYE1 221 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 KIR2DL5AQ8N109 375 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 RNF148Q8N7C7 305 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 OR52J3Q8NH60 311 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 KIR2DL5BQ8NHK3 375 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 RSRC1Q96IZ7 334 aaKnown RBP6.01□□□□□ -1.45
USP54-211ENST00000474929 CEP19Q96LK0 163 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 ERMAPQ96PL5 475 aaPredicted RBP6.01□□□□□ -1.45
USP54-211ENST00000474929 SIKE1Q9BRV8 207 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 WFDC10AQ9H1F0 79 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 ZCCHC4Q9H5U6 513 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 PLSCR3Q9NRY6 295 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 ZNF355PQ9NSJ1 428 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 DNAJC27Q9NZQ0 273 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 DHDHQ9UQ10 334 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 DNAH5Q8TE73 4624 aa6.01□□□□□ -1.45
USP54-211ENST00000474929 A0A0G2JLM5 398 aa6□□□□□ -1.45
USP54-211ENST00000474929 TMEM82A0PJX8 343 aa6□□□□□ -1.45
USP54-211ENST00000474929 G3V318 75 aa6□□□□□ -1.45
USP54-211ENST00000474929 M0R2N4 97 aa6□□□□□ -1.45
USP54-211ENST00000474929 CXCR6O00574 342 aa6□□□□□ -1.45
USP54-211ENST00000474929 IGHV3-11P01762 117 aa6□□□□□ -1.45
USP54-211ENST00000474929 CSTBP04080 98 aaKnown RBP6□□□□□ -1.45
USP54-211ENST00000474929 CSN3P07498 182 aa6□□□□□ -1.45
USP54-211ENST00000474929 RPS27P42677 84 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms