RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 OCM2P0CE71 109 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 OCMP0CE72 109 aaPredicted RBP14.91□□□□□ -0.02
COL7A1-209ENST00000474432 CGB3P0DN86 165 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 CGB7P0DN87 165 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 TMEM225BP0DP42 221 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 CDK2P24941 298 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 ETV1P50549 477 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 GBX2P52951 348 aaPredicted RBP14.91□□□□□ -0.02
COL7A1-209ENST00000474432 BLCAPP62952 87 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 C17orf58Q2M2W7 97 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 KLHL22Q53GT1 634 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 ZNF691Q5VV52 312 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 ELP2Q6IA86 826 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 Q8NFD4 153 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 PPIL3Q9H2H8 161 aaKnown RBP14.91□□□□□ -0.02
COL7A1-209ENST00000474432 NEK6Q9HC98 313 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 SMPD3Q9NY59 655 aaPredicted RBP14.91□□□□□ -0.02
COL7A1-209ENST00000474432 TAS2R3Q9NYW6 316 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 DHDHQ9UQ10 334 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 ODAMA1E959 279 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 GABRPO00591 440 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 CLIC3O95833 236 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 HCKP08631 526 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 VSIG10L2P0DP72 767 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 ZNF44P15621 663 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 CD34P28906 385 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 SCN1BQ07699 218 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 OR2G6Q5TZ20 316 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 ASCL4Q6XD76 172 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 TRAPPC6BQ86SZ2 158 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 ABHD12Q8N2K0 398 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 CHST4Q8NCG5 386 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 PXT1Q8NFP0 134 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 RDH12Q96NR8 316 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 MYCBPQ99417 103 aaPredicted RBP14.9□□□□□ -0.02
COL7A1-209ENST00000474432 WNT10AQ9GZT5 417 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 ZNF286AQ9HBT8 521 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 ABCB10Q9NRK6 738 aa14.9□□□□□ -0.02
COL7A1-209ENST00000474432 TRGV10A0A0A0MS01 117 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 TRAV24A0A0B4J272 114 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 DEGS1O15121 323 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 BAG2O95816 211 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 LALBAP00709 142 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 RPSAP08865 295 aaKnown RBP14.89□□□□□ -0.03
COL7A1-209ENST00000474432 HTR1DP28221 377 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 SOX2P48431 317 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 MTNR1BP49286 362 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 BDH1Q02338 343 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 SLC34A1Q06495 639 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 ATXN7L3Q14CW9 347 aaPredicted RBP14.89□□□□□ -0.03
COL7A1-209ENST00000474432 C1QL4Q86Z23 238 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 OR51T1Q8NGJ9 327 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 NDNFQ8TB73 568 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 CNIH3Q8TBE1 160 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 TSEN15Q8WW01 171 aaKnown RBP14.89□□□□□ -0.03
COL7A1-209ENST00000474432 GAL3ST2Q9H3Q3 398 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 TAS2R4Q9NYW5 299 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 ZNF581Q9P0T4 197 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 PITPNC1Q9UKF7 332 aa14.89□□□□□ -0.03
COL7A1-209ENST00000474432 A0A087X0M5 115 aa14.88□□□□□ -0.03
COL7A1-209ENST00000474432 A0A1B0GX30 115 aa14.88□□□□□ -0.03
COL7A1-209ENST00000474432 FAM172BPA6NC97 362 aa14.88□□□□□ -0.03
COL7A1-209ENST00000474432 ADARB2-AS1A8MUL3 147 aa14.88□□□□□ -0.03
COL7A1-209ENST00000474432 LY6LH3BQJ8 138 aa14.88□□□□□ -0.03
COL7A1-209ENST00000474432 OGG1O15527 345 aa14.88□□□□□ -0.03
COL7A1-209ENST00000474432 CD28P10747 220 aa14.88□□□□□ -0.03
COL7A1-209ENST00000474432 ZSCAN26Q16670 478 aa14.88□□□□□ -0.03
COL7A1-209ENST00000474432 KRBOX4Q5JUW0 171 aa14.88□□□□□ -0.03
COL7A1-209ENST00000474432 RPL22L1Q6P5R6 122 aaKnown RBP14.88□□□□□ -0.03
COL7A1-209ENST00000474432 RTN4RL2Q86UN3 420 aa14.88□□□□□ -0.03
COL7A1-209ENST00000474432 HAVCR2Q8TDQ0 301 aa14.88□□□□□ -0.03
COL7A1-209ENST00000474432 ING3Q9NXR8 418 aa14.88□□□□□ -0.03
COL7A1-209ENST00000474432 DPM3Q9P2X0 92 aa14.88□□□□□ -0.03
COL7A1-209ENST00000474432 FUOMA2VDF0 154 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 H0YJX3 145 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 F2RL2O00254 374 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 RAB3AP20336 220 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 CD24P25063 80 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 DCKP27707 260 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 TMEM95Q3KNT9 176 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 CCDC58Q4VC31 144 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 OR52W1Q6IF63 320 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 LYG1Q8N1E2 194 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 DTX3Q8N9I9 347 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 ZNF485Q8NCK3 441 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 ZNF555Q8NEP9 628 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 OR10K1Q8NGX5 313 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 ORAI1Q96D31 301 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 OCSTAMPQ9BR26 566 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 PRSS22Q9GZN4 317 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 CLEC2DQ9UHP7 191 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 PCDHGB5Q9Y5G0 923 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 NOTCH3Q9UM47 2321 aa14.87□□□□□ -0.03
COL7A1-209ENST00000474432 ZNF729A6NN14 1252 aaPredicted RBP14.86□□□□□ -0.03
COL7A1-209ENST00000474432 OPN1MWP04001 364 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 ALDOBP05062 364 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 OPN1MW2P0DN77 364 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 OPN1MW3P0DN78 364 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 PTGFRP43088 359 aa14.86□□□□□ -0.03
COL7A1-209ENST00000474432 OR3A4PP47883 348 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms