RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PIGHQ14442 188 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 CAPRIN1Q14444 709 aaKnown RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 IMPG1Q17R60 797 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 FBXO48Q5FWF7 155 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 COQ5Q5HYK3 327 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 ZNF691Q5VV52 312 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 ZNF470Q6ECI4 717 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 GLYATQ6IB77 296 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 LYPD2Q6UXB3 125 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 FAM183BPQ6ZVS7 135 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 PHF13Q86YI8 300 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 RIMKLAQ8IXN7 391 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 CYP4Z2PQ8N1L4 340 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 DUSP18Q8NEJ0 188 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 ZNF431Q8TF32 576 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 ASZ1Q8WWH4 475 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 FAM131CQ96AQ9 280 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 MRPL48Q96GC5 212 aaKnown RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 TRNT1Q96Q11 434 aaKnown RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 EBNA1BP2Q99848 306 aaKnown RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 REG4Q9BYZ8 158 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 TM6SF2Q9BZW4 377 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 ZNF436Q9C0F3 470 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 ALX4Q9H161 411 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 ASB7Q9H672 318 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 C11orf49Q9H6J7 331 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 WDR55Q9H6Y2 383 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 ACOT13Q9NPJ3 140 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 TUBG2Q9NRH3 451 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 SDHAF2Q9NX18 166 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 CMTM6Q9NX76 183 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 BABAM2Q9NXR7 383 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 C3orf18Q9UK00 162 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 ORC6Q9Y5N6 252 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 F11RQ9Y624 299 aaKnown RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 SLC22A7Q9Y694 548 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 ADAMTS7Q9UKP4 1686 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 SIPA1L1O43166 1804 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 TMEM2Q9UHN6 1383 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 PINLYPA6NC86 204 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 SLC22A20A6NK97 555 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 FAM166BA8MTA8 275 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 INS-IGF2F8WCM5 200 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 G3V2T6 193 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 K7EMT4 169 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 APOC4-APOC2K7ER74 178 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 SULT1C2O00338 296 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 PRMT5O14744 637 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-212ENST00000473961 TRAF3IP2O43734 574 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-212ENST00000473961 SLC37A4O43826 429 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 ORC5O43913 435 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 RAD1O60671 282 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 APOC2P02655 101 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 GLAP06280 429 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 FBP1P09467 338 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 TACSTD2P09758 323 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 OR56A5P0C7T3 313 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 ZNF806P0C7X5 589 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 MLNP12872 115 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 SPI1P17947 270 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 CSNK2A2P19784 350 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-212ENST00000473961 CA5AP35218 305 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 CSKP41240 450 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 MAGEA12P43365 314 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 RAB7AP51149 207 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 ARPP19P56211 112 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 AP1S1P61966 158 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 UBE2IP63279 158 aaKnown RBP2.91□□□□□ -1.94
BRCA1-212ENST00000473961 POU2AF1Q16633 256 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 FAM83EQ2M2I3 478 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 CDNFQ49AH0 187 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 CDKL4Q5MAI5 379 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 STEAP4Q687X5 459 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 LAIR2Q6ISS4 152 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 SLC25A25Q6KCM7 469 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 ERICH5Q6P6B1 374 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 TBPL2Q6SJ96 375 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 C12orf54Q6X4T0 127 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 TMPRSS11AQ6ZMR5 421 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 RTL4Q6ZR62 310 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 RASSF6Q6ZTQ3 369 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 ZNF720Q7Z2F6 126 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 STPG2Q8N412 459 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 C12orf45Q8N5I9 185 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-212ENST00000473961 NOXO1Q8NFA2 376 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 OR51L1Q8NGJ5 315 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 OR6K6Q8NGW6 343 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 OR51F2Q8NH61 342 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 CLHC1Q8NHS4 586 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 RNASE11Q8TAA1 199 aaKnown RBP2.91□□□□□ -1.94
BRCA1-212ENST00000473961 ACTL9Q8TC94 416 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 SFT2D1Q8WV19 159 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 LRRC29Q8WV35 223 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 TMBIM1Q969X1 311 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 CPNE4Q96A23 557 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-212ENST00000473961 RPEQ96AT9 228 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 LINC00052Q96N35 136 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 MARVELD1Q9BSK0 173 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 BEX2Q9BXY8 128 aa2.91□□□□□ -1.94
BRCA1-212ENST00000473961 PRRG3Q9BZD7 231 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms