RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 LEUTXA8MZ59 168 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 J3QRE1 110 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 MT-ND2P03891 347 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 CD24P25063 80 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 CEACAM3P40198 252 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 GLIPR1P48060 266 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 SNRPGP62308 76 aaKnown RBP15.82■□□□□ 0.12
COL9A3-210ENST00000472880 SCN1BQ07699 218 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 SLC25A30Q5SVS4 291 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 SAXO1Q8IYX7 474 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 CHST4Q8NCG5 386 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 OR4D6Q8NGJ1 314 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 CORO2AQ92828 525 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 PELI1Q96FA3 418 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 SLC29A1Q99808 456 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 SLC25A33Q9BSK2 321 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 ING3Q9NXR8 418 aa15.82■□□□□ 0.12
COL9A3-210ENST00000472880 ODAMA1E959 279 aa15.81■□□□□ 0.12
COL9A3-210ENST00000472880 OR4C45A6NMZ5 311 aa15.81■□□□□ 0.12
COL9A3-210ENST00000472880 TOR1AO14656 332 aa15.81■□□□□ 0.12
COL9A3-210ENST00000472880 BAG2O95816 211 aa15.81■□□□□ 0.12
COL9A3-210ENST00000472880 IGLV1-47P01700 117 aa15.81■□□□□ 0.12
COL9A3-210ENST00000472880 CSN2P05814 226 aa15.81■□□□□ 0.12
COL9A3-210ENST00000472880 HCKP08631 526 aa15.81■□□□□ 0.12
COL9A3-210ENST00000472880 PF4V1P10720 104 aa15.81■□□□□ 0.12
COL9A3-210ENST00000472880 CD33P20138 364 aa15.81■□□□□ 0.12
COL9A3-210ENST00000472880 LMO1P25800 156 aa15.81■□□□□ 0.12
COL9A3-210ENST00000472880 ALKBH1Q13686 389 aaKnown RBP15.81■□□□□ 0.12
COL9A3-210ENST00000472880 KRBOX4Q5JUW0 171 aa15.81■□□□□ 0.12
COL9A3-210ENST00000472880 CENPVQ7Z7K6 275 aaPredicted RBP15.81■□□□□ 0.12
COL9A3-210ENST00000472880 CREB3L1Q96BA8 519 aa15.81■□□□□ 0.12
COL9A3-210ENST00000472880 PHF21AQ96BD5 680 aa15.81■□□□□ 0.12
COL9A3-210ENST00000472880 MYCBPQ99417 103 aaPredicted RBP15.81■□□□□ 0.12
COL9A3-210ENST00000472880 ZCCHC4Q9H5U6 513 aa15.81■□□□□ 0.12
COL9A3-210ENST00000472880 ZNF286AQ9HBT8 521 aa15.81■□□□□ 0.12
COL9A3-210ENST00000472880 CD34P28906 385 aa15.8■□□□□ 0.12
COL9A3-210ENST00000472880 GDNFP39905 211 aa15.8■□□□□ 0.12
COL9A3-210ENST00000472880 CD83Q01151 205 aa15.8■□□□□ 0.12
COL9A3-210ENST00000472880 ATXN7L3Q14CW9 347 aaPredicted RBP15.8■□□□□ 0.12
COL9A3-210ENST00000472880 HLA-DRB5Q30154 266 aa15.8■□□□□ 0.12
COL9A3-210ENST00000472880 ABCA11PQ4W5N1 156 aa15.8■□□□□ 0.12
COL9A3-210ENST00000472880 RNF144BQ7Z419 303 aa15.8■□□□□ 0.12
COL9A3-210ENST00000472880 ALG8Q9BVK2 526 aa15.8■□□□□ 0.12
COL9A3-210ENST00000472880 ZNF729A6NN14 1252 aaPredicted RBP15.79■□□□□ 0.12
COL9A3-210ENST00000472880 SLC33A1O00400 549 aaPredicted RBP15.79■□□□□ 0.12
COL9A3-210ENST00000472880 OR2F2O95006 317 aa15.79■□□□□ 0.12
COL9A3-210ENST00000472880 LPLP06858 475 aa15.79■□□□□ 0.12
COL9A3-210ENST00000472880 TMEM225BP0DP42 221 aa15.79■□□□□ 0.12
COL9A3-210ENST00000472880 LOXL3P58215 753 aa15.79■□□□□ 0.12
COL9A3-210ENST00000472880 RBM39Q14498 530 aaKnown RBP15.79■□□□□ 0.12
COL9A3-210ENST00000472880 ZSCAN26Q16670 478 aa15.79■□□□□ 0.12
COL9A3-210ENST00000472880 CCDC144NLQ6NUI1 221 aa15.79■□□□□ 0.12
COL9A3-210ENST00000472880 OR4X2Q8NGF9 303 aa15.79■□□□□ 0.12
COL9A3-210ENST00000472880 LGALS12Q96DT0 336 aa15.79■□□□□ 0.12
COL9A3-210ENST00000472880 COQ2Q96H96 371 aa15.79■□□□□ 0.12
COL9A3-210ENST00000472880 AURKAIP1Q9NWT8 199 aaPredicted RBP15.79■□□□□ 0.12
COL9A3-210ENST00000472880 OR6C3Q9NZP0 311 aa15.79■□□□□ 0.12
COL9A3-210ENST00000472880 EXOGQ9Y2C4 368 aaKnown RBP15.79■□□□□ 0.12
COL9A3-210ENST00000472880 MYRFQ9Y2G1 1151 aa15.79■□□□□ 0.12
COL9A3-210ENST00000472880 GMPPBQ9Y5P6 360 aa15.79■□□□□ 0.12
COL9A3-210ENST00000472880 TCRBV4S1A1TA0A5B7 111 aa15.78■□□□□ 0.12
COL9A3-210ENST00000472880 BUB1B-PAK6H3BSN5 160 aa15.78■□□□□ 0.12
COL9A3-210ENST00000472880 DEGS1O15121 323 aa15.78■□□□□ 0.12
COL9A3-210ENST00000472880 SULT1B1O43704 296 aa15.78■□□□□ 0.12
COL9A3-210ENST00000472880 PF4P02776 101 aa15.78■□□□□ 0.12
COL9A3-210ENST00000472880 RPSAP08865 295 aaKnown RBP15.78■□□□□ 0.12
COL9A3-210ENST00000472880 DBTP11182 482 aaKnown RBP15.78■□□□□ 0.12
COL9A3-210ENST00000472880 MNDAP41218 407 aa15.78■□□□□ 0.12
COL9A3-210ENST00000472880 PRRX1P54821 245 aa15.78■□□□□ 0.12
COL9A3-210ENST00000472880 GALEQ14376 348 aa15.78■□□□□ 0.12
COL9A3-210ENST00000472880 KISS1Q15726 138 aa15.78■□□□□ 0.12
COL9A3-210ENST00000472880 TPTE2P1Q5T6R2 138 aa15.78■□□□□ 0.12
COL9A3-210ENST00000472880 Q6P435 159 aa15.78■□□□□ 0.12
COL9A3-210ENST00000472880 SERPINA12Q8IW75 414 aa15.78■□□□□ 0.12
COL9A3-210ENST00000472880 SYS1Q8N2H4 156 aa15.78■□□□□ 0.12
COL9A3-210ENST00000472880 TSEN15Q8WW01 171 aaKnown RBP15.78■□□□□ 0.12
COL9A3-210ENST00000472880 RBM14Q96PK6 669 aaKnown RBP15.78■□□□□ 0.12
COL9A3-210ENST00000472880 PPIL3Q9H2H8 161 aaKnown RBP15.78■□□□□ 0.12
COL9A3-210ENST00000472880 TSSC4Q9Y5U2 329 aaPredicted RBP15.78■□□□□ 0.12
COL9A3-210ENST00000472880 A0A087X0M5 115 aa15.77■□□□□ 0.12
COL9A3-210ENST00000472880 A0A1B0GX30 115 aa15.77■□□□□ 0.12
COL9A3-210ENST00000472880 TMEM212A6NML5 194 aa15.77■□□□□ 0.12
COL9A3-210ENST00000472880 HSPB6O14558 160 aa15.77■□□□□ 0.12
COL9A3-210ENST00000472880 NFYBP25208 207 aa15.77■□□□□ 0.12
COL9A3-210ENST00000472880 GLP1RP43220 463 aa15.77■□□□□ 0.12
COL9A3-210ENST00000472880 OR3A4PP47883 348 aa15.77■□□□□ 0.12
COL9A3-210ENST00000472880 MTNR1BP49286 362 aa15.77■□□□□ 0.12
COL9A3-210ENST00000472880 ZP1P60852 638 aa15.77■□□□□ 0.12
COL9A3-210ENST00000472880 KHDC1LQ5JSQ8 128 aa15.77■□□□□ 0.12
COL9A3-210ENST00000472880 LHFPL3Q86UP9 236 aa15.77■□□□□ 0.12
COL9A3-210ENST00000472880 OR5D14Q8NGL3 314 aa15.77■□□□□ 0.12
COL9A3-210ENST00000472880 CPNE2Q96FN4 548 aaPredicted RBP15.77■□□□□ 0.12
COL9A3-210ENST00000472880 AASSQ9UDR5 926 aa15.77■□□□□ 0.12
COL9A3-210ENST00000472880 DHDHQ9UQ10 334 aa15.77■□□□□ 0.12
COL9A3-210ENST00000472880 LOC100130705A0A1B0GUX0 176 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 OOSP1A8MZH6 123 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 H0YJX3 145 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 M0QZK8 103 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 ALX3O95076 343 aa15.76■□□□□ 0.11
COL9A3-210ENST00000472880 CCDC159P0C7I6 412 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms