RNA–Protein interactions for RNA: ENST00000472524.1

CCDC88B-205, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 779 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-205ENST00000472524 Q6P435 159 aa12.67□□□□□ -0.38
CCDC88B-205ENST00000472524 C11orf88Q6PI97 169 aa12.67□□□□□ -0.38
CCDC88B-205ENST00000472524 SATL1Q86VE3 508 aa12.67□□□□□ -0.38
CCDC88B-205ENST00000472524 CNIH3Q8TBE1 160 aa12.67□□□□□ -0.38
CCDC88B-205ENST00000472524 GPER1Q99527 375 aa12.67□□□□□ -0.38
CCDC88B-205ENST00000472524 GAL3ST2Q9H3Q3 398 aa12.67□□□□□ -0.38
CCDC88B-205ENST00000472524 ZNF702PQ9H963 129 aa12.67□□□□□ -0.38
CCDC88B-205ENST00000472524 FGF20Q9NP95 211 aaPredicted RBP12.67□□□□□ -0.38
CCDC88B-205ENST00000472524 TAS2R4Q9NYW5 299 aa12.67□□□□□ -0.38
CCDC88B-205ENST00000472524 MINOS1-NBL1R4GNA1 71 aa12.67□□□□□ -0.38
CCDC88B-205ENST00000472524 SLC33A1O00400 549 aaPredicted RBP12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 HSPB6O14558 160 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 DEGS1O15121 323 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 CLIC3O95833 236 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 RAB3AP20336 220 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 CDK2P24941 298 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 LMO1P25800 156 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 ETV1P50549 477 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 LRRC36Q1X8D7 754 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 KRBOX4Q5JUW0 171 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 XAF1Q6GPH4 301 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 OR51A2Q8NGJ7 313 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 HAVCR2Q8TDQ0 301 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 CYGBQ8WWM9 190 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 RGP1Q92546 391 aaPredicted RBP12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 COQ2Q96H96 371 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 RDH12Q96NR8 316 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 NR1H4Q96RI1 486 aaPredicted RBP12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 FAM192AQ9GZU8 254 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 RHOFQ9HBH0 211 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 PITPNC1Q9UKF7 332 aa12.66□□□□□ -0.38
CCDC88B-205ENST00000472524 ODAMA1E959 279 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 GABRPO00591 440 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 MAGEB3O15480 346 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 ALX3O95076 343 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 HTR1DP28221 377 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 GDNFP39905 211 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 PTGFRP43088 359 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 MTNR1BP49286 362 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 CDK5R1Q15078 307 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 OR2G6Q5TZ20 316 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 ABHD12Q8N2K0 398 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 DTX3Q8N9I9 347 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 CHST4Q8NCG5 386 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 OR4P4Q8NGL7 312 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 TNFAIP8L1Q8WVP5 186 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 CPNE2Q96FN4 548 aaPredicted RBP12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 JAM3Q9BX67 310 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 CDCA4Q9BXL8 241 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 PPIL3Q9H2H8 161 aaKnown RBP12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 TAS2R3Q9NYW6 316 aa12.65□□□□□ -0.38
CCDC88B-205ENST00000472524 H0YJX3 145 aa12.64□□□□□ -0.39
CCDC88B-205ENST00000472524 CSN2P05814 226 aa12.64□□□□□ -0.39
CCDC88B-205ENST00000472524 DCKP27707 260 aa12.64□□□□□ -0.39
CCDC88B-205ENST00000472524 DYNLT3P51808 116 aa12.64□□□□□ -0.39
CCDC88B-205ENST00000472524 ARSJQ5FYB0 599 aaPredicted RBP12.64□□□□□ -0.39
CCDC88B-205ENST00000472524 OR52W1Q6IF63 320 aa12.64□□□□□ -0.39
CCDC88B-205ENST00000472524 RPL22L1Q6P5R6 122 aaKnown RBP12.64□□□□□ -0.39
CCDC88B-205ENST00000472524 HEPN1Q6WQI6 88 aa12.64□□□□□ -0.39
CCDC88B-205ENST00000472524 TMPRSS11AQ6ZMR5 421 aa12.64□□□□□ -0.39
CCDC88B-205ENST00000472524 OR10K1Q8NGX5 313 aa12.64□□□□□ -0.39
CCDC88B-205ENST00000472524 GPR148Q8TDV2 347 aa12.64□□□□□ -0.39
CCDC88B-205ENST00000472524 CORO2AQ92828 525 aa12.64□□□□□ -0.39
CCDC88B-205ENST00000472524 IRGMA1A4Y4 181 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 G3V4G9 280 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 CD2P06729 351 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 MYL12AP19105 171 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 GLP1RP43220 463 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 RSU1Q15404 277 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 PAN3Q58A45 887 aaKnown RBP12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 RTN4RL2Q86UN3 420 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 LYG1Q8N1E2 194 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 PXT1Q8NFP0 134 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 OR4D6Q8NGJ1 314 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 ZNF596Q8TC21 504 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 CFHR4Q92496 578 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 TMEM106AQ96A25 262 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 OR5M11Q96RB7 305 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 PRSS22Q9GZN4 317 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 ZNF286AQ9HBT8 521 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 SERTAD4Q9NUC0 356 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 DPM3Q9P2X0 92 aa12.63□□□□□ -0.39
CCDC88B-205ENST00000472524 PEX14O75381 377 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 FBXO24O75426 580 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 HTR3BO95264 441 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 CD24P25063 80 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 NFYBP25208 207 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 OR3A4PP47883 348 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 PPP3R1P63098 170 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 TMEM95Q3KNT9 176 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 PIGYQ3MUY2 71 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 CCDC58Q4VC31 144 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 ELP2Q6IA86 826 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 ZNF529Q6P280 563 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 Q6ZS46 218 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 Q8N2B8 174 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 OR13C5Q8NGS8 318 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 ORAI1Q96D31 301 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 OR6C3Q9NZP0 311 aa12.62□□□□□ -0.39
CCDC88B-205ENST00000472524 CLEC2DQ9UHP7 191 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms