RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 STMN2Q93045 179 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 RDH12Q96NR8 316 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 CDCA4Q9BXL8 241 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 GAL3ST2Q9H3Q3 398 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 FGF20Q9NP95 211 aaPredicted RBP7.27□□□□□ -1.25
USF1-204ENST00000472217 PITPNC1Q9UKF7 332 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 HILPDAQ9Y5L2 63 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 MINOS1-NBL1R4GNA1 71 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 ODAMA1E959 279 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 FUOMA2VDF0 154 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 FAM172BPA6NC97 362 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 GABRPO00591 440 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 CLIC3O95833 236 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 CSN2P05814 226 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 CSF1P09603 554 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 VSIG10L2P0DP72 767 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 RAB3AP20336 220 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 CDK2P24941 298 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 DCKP27707 260 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 SOX2P48431 317 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 SLC34A1Q06495 639 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 LRRC36Q1X8D7 754 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 PDLIM3Q53GG5 364 aaPredicted RBP7.26□□□□□ -1.25
USF1-204ENST00000472217 OR2G6Q5TZ20 316 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 HEPN1Q6WQI6 88 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 Q8N2B8 174 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 ABHD12Q8N2K0 398 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 CHST4Q8NCG5 386 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 FAM110DQ8TAY7 271 aaPredicted RBP7.26□□□□□ -1.25
USF1-204ENST00000472217 CNIH3Q8TBE1 160 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 HAVCR2Q8TDQ0 301 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 CFHR4Q92496 578 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 CORO2AQ92828 525 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 COQ2Q96H96 371 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 PPIL3Q9H2H8 161 aaKnown RBP7.26□□□□□ -1.25
USF1-204ENST00000472217 SERTAD4Q9NUC0 356 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 ING3Q9NXR8 418 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 TAS2R4Q9NYW5 299 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 TAS2R3Q9NYW6 316 aa7.26□□□□□ -1.25
USF1-204ENST00000472217 TET2Q6N021 2002 aaPredicted RBP7.26□□□□□ -1.25
USF1-204ENST00000472217 H0YJX3 145 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 HSPB6O14558 160 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 DEGS1O15121 323 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 IGLV1-47P01700 117 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 HTR1DP28221 377 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 CD34P28906 385 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 PTGFRP43088 359 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 MTNR1BP49286 362 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 BDH1Q02338 343 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 CCDC58Q4VC31 144 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 KRBOX4Q5JUW0 171 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 ELP2Q6IA86 826 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 OR52W1Q6IF63 320 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 RPL22L1Q6P5R6 122 aaKnown RBP7.25□□□□□ -1.25
USF1-204ENST00000472217 TMPRSS11AQ6ZMR5 421 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 RTN4RL2Q86UN3 420 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 SATL1Q86VE3 508 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 DTX3Q8N9I9 347 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 PXT1Q8NFP0 134 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 OR10K1Q8NGX5 313 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 GPR148Q8TDV2 347 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 TNFAIP8L1Q8WVP5 186 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 CYGBQ8WWM9 190 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 TMEM106AQ96A25 262 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 CPNE2Q96FN4 548 aaPredicted RBP7.25□□□□□ -1.25
USF1-204ENST00000472217 NR1H4Q96RI1 486 aaPredicted RBP7.25□□□□□ -1.25
USF1-204ENST00000472217 GPER1Q99527 375 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 ZNF286AQ9HBT8 521 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 DPM3Q9P2X0 92 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 KIF25Q9UIL4 384 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 DIMT1Q9UNQ2 313 aaKnown RBP7.25□□□□□ -1.25
USF1-204ENST00000472217 SIRT4Q9Y6E7 314 aaPredicted RBP7.25□□□□□ -1.25
USF1-204ENST00000472217 TRRAPQ9Y4A5 3859 aa7.25□□□□□ -1.25
USF1-204ENST00000472217 TRAV24A0A0B4J272 114 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 ZNF729A6NN14 1252 aaPredicted RBP7.24□□□□□ -1.25
USF1-204ENST00000472217 FAM90A22PA8MWA6 464 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 MAGEB3O15480 346 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 LALBAP00709 142 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 CD2P06729 351 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 CD24P25063 80 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 GLP1RP43220 463 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 OR3A4PP47883 348 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 RSU1Q15404 277 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 C17orf58Q2M2W7 97 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 PIGYQ3MUY2 71 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 FBLN7Q53RD9 439 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 PAN3Q58A45 887 aaKnown RBP7.24□□□□□ -1.25
USF1-204ENST00000472217 UTF1Q5T230 341 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 ASCL4Q6XD76 172 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 Q6ZS46 218 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 C1QL4Q86Z23 238 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 LYG1Q8N1E2 194 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 Q8NFD4 153 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 OR4D6Q8NGJ1 314 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 OR51T1Q8NGJ9 327 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 OR13A1Q8NGR1 328 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 OR13C5Q8NGS8 318 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 ZNF596Q8TC21 504 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 ORAI1Q96D31 301 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 SMIM19Q96E16 107 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms