RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 BDH1Q02338 343 aa18.08■□□□□ 0.48
C9orf3-213ENST00000471978 KISS1Q15726 138 aa18.08■□□□□ 0.48
C9orf3-213ENST00000471978 TMEM95Q3KNT9 176 aa18.08■□□□□ 0.48
C9orf3-213ENST00000471978 KRBOX4Q5JUW0 171 aa18.08■□□□□ 0.48
C9orf3-213ENST00000471978 SAMD5Q5TGI4 173 aa18.08■□□□□ 0.48
C9orf3-213ENST00000471978 NDUFA11Q86Y39 141 aa18.08■□□□□ 0.48
C9orf3-213ENST00000471978 OR5AK2Q8NH90 309 aa18.08■□□□□ 0.48
C9orf3-213ENST00000471978 RHOXF1Q8NHV9 184 aa18.08■□□□□ 0.48
C9orf3-213ENST00000471978 CITED2Q99967 270 aaPredicted RBP18.08■□□□□ 0.48
C9orf3-213ENST00000471978 MMP28Q9H239 520 aa18.08■□□□□ 0.48
C9orf3-213ENST00000471978 ERVK13-1Q9NX77 482 aa18.08■□□□□ 0.48
C9orf3-213ENST00000471978 ING3Q9NXR8 418 aa18.08■□□□□ 0.48
C9orf3-213ENST00000471978 PLXNB1O43157 2135 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 TMEM212A6NML5 194 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 E9PI62 339 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 SLC33A1O00400 549 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-213ENST00000471978 DEGS1O15121 323 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 SULT1B1O43704 296 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 ALX3O95076 343 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 CSN2P05814 226 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 CD24P25063 80 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 GDNFP39905 211 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 PTGFRP43088 359 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 ZP1P60852 638 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 PARP16Q8N5Y8 322 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 STMN2Q93045 179 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 R3HDM4Q96D70 268 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 COQ2Q96H96 371 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 PDCD1LG2Q9BQ51 273 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 C9orf16Q9BUW7 83 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 INPP5EQ9NRR6 644 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 DHDHQ9UQ10 334 aa18.07■□□□□ 0.48
C9orf3-213ENST00000471978 LEUTXA8MZ59 168 aa18.06■□□□□ 0.48
C9orf3-213ENST00000471978 IGLV1-47P01700 117 aa18.06■□□□□ 0.48
C9orf3-213ENST00000471978 CCDC159P0C7I6 412 aa18.06■□□□□ 0.48
C9orf3-213ENST00000471978 BRS3P32247 399 aa18.06■□□□□ 0.48
C9orf3-213ENST00000471978 RAB40BQ12829 278 aa18.06■□□□□ 0.48
C9orf3-213ENST00000471978 MRPL28Q13084 256 aaKnown RBP18.06■□□□□ 0.48
C9orf3-213ENST00000471978 ATXN7L3Q14CW9 347 aaPredicted RBP18.06■□□□□ 0.48
C9orf3-213ENST00000471978 KIAA2026Q5HYC2 2103 aa18.06■□□□□ 0.48
C9orf3-213ENST00000471978 KPRPQ5T749 579 aaPredicted RBP18.06■□□□□ 0.48
C9orf3-213ENST00000471978 CCDC121Q6ZUS5 278 aa18.06■□□□□ 0.48
C9orf3-213ENST00000471978 C10orf67Q8IYJ2 551 aa18.06■□□□□ 0.48
C9orf3-213ENST00000471978 OR4F17Q8NGA8 305 aa18.06■□□□□ 0.48
C9orf3-213ENST00000471978 OR4D6Q8NGJ1 314 aa18.06■□□□□ 0.48
C9orf3-213ENST00000471978 TSEN15Q8WW01 171 aaKnown RBP18.06■□□□□ 0.48
C9orf3-213ENST00000471978 OR4F4Q96R69 305 aa18.06■□□□□ 0.48
C9orf3-213ENST00000471978 SLC29A1Q99808 456 aa18.06■□□□□ 0.48
C9orf3-213ENST00000471978 OCSTAMPQ9BR26 566 aa18.06■□□□□ 0.48
C9orf3-213ENST00000471978 ZNF649Q9BS31 505 aa18.06■□□□□ 0.48
C9orf3-213ENST00000471978 ZNF286AQ9HBT8 521 aa18.06■□□□□ 0.48
C9orf3-213ENST00000471978 TOR1AO14656 332 aa18.05■□□□□ 0.48
C9orf3-213ENST00000471978 XPNPEP2O43895 674 aa18.05■□□□□ 0.48
C9orf3-213ENST00000471978 CD34P28906 385 aa18.05■□□□□ 0.48
C9orf3-213ENST00000471978 ARHGDIBP52566 201 aa18.05■□□□□ 0.48
C9orf3-213ENST00000471978 GBX2P52951 348 aaPredicted RBP18.05■□□□□ 0.48
C9orf3-213ENST00000471978 CDK5R1Q15078 307 aa18.05■□□□□ 0.48
C9orf3-213ENST00000471978 ZNF691Q5VV52 312 aa18.05■□□□□ 0.48
C9orf3-213ENST00000471978 C16orf82Q7Z2V1 217 aa18.05■□□□□ 0.48
C9orf3-213ENST00000471978 OR52I1Q8NGK6 324 aa18.05■□□□□ 0.48
C9orf3-213ENST00000471978 AKR1E2Q96JD6 320 aa18.05■□□□□ 0.48
C9orf3-213ENST00000471978 PPIL3Q9H2H8 161 aaKnown RBP18.05■□□□□ 0.48
C9orf3-213ENST00000471978 NOTCH3Q9UM47 2321 aa18.05■□□□□ 0.48
C9orf3-213ENST00000471978 LOC100130705A0A1B0GUX0 176 aa18.04■□□□□ 0.48
C9orf3-213ENST00000471978 ADARB2-AS1A8MUL3 147 aa18.04■□□□□ 0.48
C9orf3-213ENST00000471978 CEACAM3P40198 252 aa18.04■□□□□ 0.48
C9orf3-213ENST00000471978 MTNR1BP49286 362 aa18.04■□□□□ 0.48
C9orf3-213ENST00000471978 PRRX1P54821 245 aa18.04■□□□□ 0.48
C9orf3-213ENST00000471978 LPCAT4Q643R3 524 aa18.04■□□□□ 0.48
C9orf3-213ENST00000471978 OR5AU1Q8NGC0 362 aa18.04■□□□□ 0.48
C9orf3-213ENST00000471978 CAPSLQ8WWF8 208 aa18.04■□□□□ 0.48
C9orf3-213ENST00000471978 CREB3L1Q96BA8 519 aa18.04■□□□□ 0.48
C9orf3-213ENST00000471978 NR1H4Q96RI1 486 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-213ENST00000471978 LIN7BQ9HAP6 207 aa18.04■□□□□ 0.48
C9orf3-213ENST00000471978 OR6C3Q9NZP0 311 aa18.04■□□□□ 0.48
C9orf3-213ENST00000471978 RPL36Q9Y3U8 105 aaKnown RBP18.04■□□□□ 0.48
C9orf3-213ENST00000471978 ZNF729A6NN14 1252 aaPredicted RBP18.03■□□□□ 0.48
C9orf3-213ENST00000471978 H0YJX3 145 aa18.03■□□□□ 0.48
C9orf3-213ENST00000471978 BUB1B-PAK6H3BSN5 160 aa18.03■□□□□ 0.48
C9orf3-213ENST00000471978 HSPB6O14558 160 aa18.03■□□□□ 0.48
C9orf3-213ENST00000471978 PRB2P02812 416 aaPredicted RBP18.03■□□□□ 0.48
C9orf3-213ENST00000471978 C17orf58Q2M2W7 97 aa18.03■□□□□ 0.48
C9orf3-213ENST00000471978 HLA-DRB5Q30154 266 aa18.03■□□□□ 0.48
C9orf3-213ENST00000471978 CPNE2Q96FN4 548 aaPredicted RBP18.03■□□□□ 0.48
C9orf3-213ENST00000471978 SLC25A33Q9BSK2 321 aa18.03■□□□□ 0.48
C9orf3-213ENST00000471978 MRPS18AQ9NVS2 196 aaKnown RBP18.03■□□□□ 0.48
C9orf3-213ENST00000471978 FAM118AQ9NWS6 357 aa18.03■□□□□ 0.48
C9orf3-213ENST00000471978 A0A087X0M5 115 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 KBTBD11-OT1A0A1B0GTJ5 212 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 A0A1B0GX30 115 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 MAGEB3O15480 346 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 RAB3AP20336 220 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 NFYBP25208 207 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 RBM39Q14498 530 aaKnown RBP18.02■□□□□ 0.48
C9orf3-213ENST00000471978 ZSCAN26Q16670 478 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 KLHL22Q53GT1 634 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 PAN3Q58A45 887 aaKnown RBP18.02■□□□□ 0.48
C9orf3-213ENST00000471978 OXLD1Q5BKU9 147 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 TPTE2P1Q5T6R2 138 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 ELP2Q6IA86 826 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms