RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 PARP16Q8N5Y8 322 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 OR5AK2Q8NH90 309 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 NDNFQ8TB73 568 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 RPS4Y2Q8TD47 263 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 TSEN15Q8WW01 171 aaKnown RBP12.35□□□□□ -0.43
COL1A1-203ENST00000471344 CFHR4Q92496 578 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 CDCA4Q9BXL8 241 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 CLEC7AQ9BXN2 247 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 ABCB10Q9NRK6 738 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 INPP5EQ9NRR6 644 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 ZNF581Q9P0T4 197 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 TMEM212A6NML5 194 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 F2RL2O00254 374 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 SLC33A1O00400 549 aaPredicted RBP12.34□□□□□ -0.43
COL1A1-203ENST00000471344 TMEM225BP0DP42 221 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 CDK2P24941 298 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 LMO1P25800 156 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 ERP29P30040 261 aaKnown RBP12.34□□□□□ -0.43
COL1A1-203ENST00000471344 ETV1P50549 477 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 BLCAPP62952 87 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 MRPL28Q13084 256 aaKnown RBP12.34□□□□□ -0.43
COL1A1-203ENST00000471344 ZNF691Q5VV52 312 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 OR10K1Q8NGX5 313 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 CNIH3Q8TBE1 160 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 CYGBQ8WWM9 190 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 ORAI1Q96D31 301 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 OR5M11Q96RB7 305 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 DCLRE1BQ9H816 532 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 ZNF286AQ9HBT8 521 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 MRPS18AQ9NVS2 196 aaKnown RBP12.34□□□□□ -0.43
COL1A1-203ENST00000471344 TAS2R4Q9NYW5 299 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 GLS2Q9UI32 602 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 DHDHQ9UQ10 334 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 UBE2J1Q9Y385 318 aaPredicted RBP12.34□□□□□ -0.43
COL1A1-203ENST00000471344 SIRT4Q9Y6E7 314 aaPredicted RBP12.34□□□□□ -0.43
COL1A1-203ENST00000471344 DNAH3Q8TD57 4116 aa12.34□□□□□ -0.43
COL1A1-203ENST00000471344 ODAMA1E959 279 aa12.33□□□□□ -0.44
COL1A1-203ENST00000471344 GABRPO00591 440 aa12.33□□□□□ -0.44
COL1A1-203ENST00000471344 CD28P10747 220 aa12.33□□□□□ -0.44
COL1A1-203ENST00000471344 GBX2P52951 348 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-203ENST00000471344 MINOS1Q5TGZ0 78 aa12.33□□□□□ -0.44
COL1A1-203ENST00000471344 OR2G6Q5TZ20 316 aa12.33□□□□□ -0.44
COL1A1-203ENST00000471344 LAIR2Q6ISS4 152 aa12.33□□□□□ -0.44
COL1A1-203ENST00000471344 SERPINA12Q8IW75 414 aa12.33□□□□□ -0.44
COL1A1-203ENST00000471344 SAXO1Q8IYX7 474 aa12.33□□□□□ -0.44
COL1A1-203ENST00000471344 Q8N2B8 174 aa12.33□□□□□ -0.44
COL1A1-203ENST00000471344 ABHD12Q8N2K0 398 aa12.33□□□□□ -0.44
COL1A1-203ENST00000471344 PACRGLQ8N7B6 248 aa12.33□□□□□ -0.44
COL1A1-203ENST00000471344 OR5D14Q8NGL3 314 aa12.33□□□□□ -0.44
COL1A1-203ENST00000471344 RDH12Q96NR8 316 aa12.33□□□□□ -0.44
COL1A1-203ENST00000471344 NR1H4Q96RI1 486 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-203ENST00000471344 RPL36Q9Y3U8 105 aaKnown RBP12.33□□□□□ -0.44
COL1A1-203ENST00000471344 MINOS1-NBL1R4GNA1 71 aa12.33□□□□□ -0.44
COL1A1-203ENST00000471344 TRGV10A0A0A0MS01 117 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 ALX3O95076 343 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 LALBAP00709 142 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 CCDC159P0C7I6 412 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 DYNLT3P51808 116 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 C17orf58Q2M2W7 97 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 PIGYQ3MUY2 71 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 KRBOX4Q5JUW0 171 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 ZNF529Q6P280 563 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 HEPN1Q6WQI6 88 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 SATL1Q86VE3 508 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 OR13C5Q8NGS8 318 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 HAVCR2Q8TDQ0 301 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 CORO2AQ92828 525 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 JAM3Q9BX67 310 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 GAL3ST2Q9H3Q3 398 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 RHOFQ9HBH0 211 aa12.32□□□□□ -0.44
COL1A1-203ENST00000471344 FGF20Q9NP95 211 aaPredicted RBP12.32□□□□□ -0.44
COL1A1-203ENST00000471344 TRAV24A0A0B4J272 114 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 FAM90A22PA8MWA6 464 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 G3V4G9 280 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 H0YJX3 145 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 DEGS1O15121 323 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 IGLV1-47P01700 117 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 CSN2P05814 226 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 HTR1DP28221 377 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 PTGFRP43088 359 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 OR3A4PP47883 348 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 AQP4P55087 323 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 NSUN5P1Q3KNT7 163 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 KLHL22Q53GT1 634 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 C11orf88Q6PI97 169 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 ZNF555Q8NEP9 628 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 WIPF2Q8TF74 440 aaPredicted RBP12.31□□□□□ -0.44
COL1A1-203ENST00000471344 TNFAIP8L1Q8WVP5 186 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 FAM192AQ9GZU8 254 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 CLEC2DQ9UHP7 191 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 PCDHGB5Q9Y5G0 923 aa12.31□□□□□ -0.44
COL1A1-203ENST00000471344 TRAV39A0A0B4J263 110 aa12.3□□□□□ -0.44
COL1A1-203ENST00000471344 SH2D7A6NKC9 451 aaPredicted RBP12.3□□□□□ -0.44
COL1A1-203ENST00000471344 ADARB2-AS1A8MUL3 147 aa12.3□□□□□ -0.44
COL1A1-203ENST00000471344 FBXO24O75426 580 aa12.3□□□□□ -0.44
COL1A1-203ENST00000471344 IGHV3-7P01780 117 aa12.3□□□□□ -0.44
COL1A1-203ENST00000471344 RAB3AP20336 220 aa12.3□□□□□ -0.44
COL1A1-203ENST00000471344 CAPGP40121 348 aa12.3□□□□□ -0.44
COL1A1-203ENST00000471344 GLP1RP43220 463 aa12.3□□□□□ -0.44
COL1A1-203ENST00000471344 MTNR1BP49286 362 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms