RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 GAFA1Q96PS6 74 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 ABRACLQ9P1F3 81 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 DUX4Q9UBX2 424 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 PIGLQ9Y2B2 252 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 R4GMQ9 66 aa11.11□□□□□ -0.63
HMGN1-211ENST00000471260 FAM240BA0A1B0GVZ2 78 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 M0R1W7 72 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 RHBDL1O75783 438 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 NDUFA7O95182 113 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 PITPNAQ00169 270 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 IFITM2Q01629 132 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 CEP78Q5JTW2 689 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 CLVS2Q5SYC1 327 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 ZNF684Q5T5D7 378 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 PLCXD3Q63HM9 321 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 TMEM42Q69YG0 159 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 SFXN4Q6P4A7 337 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 FIP1L1Q6UN15 594 aaKnown RBP11.1□□□□□ -0.63
HMGN1-211ENST00000471260 MOB3CQ70IA8 216 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 NOXA1Q86UR1 476 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 ZNF573Q86YE8 665 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 ZFP41Q8N8Y5 198 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 ASCC1Q8N9N2 400 aaKnown RBP11.1□□□□□ -0.63
HMGN1-211ENST00000471260 OR4F5Q8NH21 305 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 RPS4Y2Q8TD47 263 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 CAPSLQ8WWF8 208 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 DYRK2Q92630 601 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 RFT1Q96AA3 541 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 SMIM19Q96E16 107 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 GON7Q9BXV9 100 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 CHIAQ9BZP6 476 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 DPAGT1Q9H3H5 408 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 BEX1Q9HBH7 125 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 ONECUT1Q9UBC0 465 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 OR52A1Q9UKL2 312 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 V9GYS6 101 aa11.1□□□□□ -0.63
HMGN1-211ENST00000471260 TRBV23-1A0A0A0MS06 115 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 FAM181BA6NEQ2 426 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 CTDSPLO15194 276 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 OGG1O15527 345 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 NOS1APO75052 506 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-211ENST00000471260 TPPPO94811 219 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 PSG2P11465 335 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 FAHP16930 419 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 IER3P46695 156 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 GABRA2P47869 451 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 GBX2P52951 348 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-211ENST00000471260 RAG2P55895 527 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 GMFBP60983 142 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 MFGE8Q08431 387 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-211ENST00000471260 TATDN3Q17R31 274 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 SMIM21Q3B7S5 101 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 BCL2L15Q5TBC7 163 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 NCR3LG1Q68D85 454 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 HAGHLQ6PII5 290 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-211ENST00000471260 FGFRL1Q8N441 504 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 POC1AQ8NBT0 407 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 CCDC54Q8NEL0 328 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 H1FXQ92522 213 aaKnown RBP11.09□□□□□ -0.63
HMGN1-211ENST00000471260 THRSPQ92748 146 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 SDSLQ96GA7 329 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 PGLYRP3Q96LB9 341 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 ZCCHC4Q9H5U6 513 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 ING3Q9NXR8 418 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 EXTL2Q9UBQ6 330 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 MRM2Q9UI43 246 aaKnown RBP11.09□□□□□ -0.63
HMGN1-211ENST00000471260 GTF2A1LQ9UNN4 478 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 POLDIP2Q9Y2S7 368 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 FAM96BQ9Y3D0 163 aa11.09□□□□□ -0.63
HMGN1-211ENST00000471260 IGKV1D-17A0A075B6S4 117 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 A0A0U1RQK1 487 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 SHISA3A0PJX4 238 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 NOTOA8MTQ0 251 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 J3QT63 122 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 C1QBP02746 253 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 FBP1P09467 338 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 NDUFB7P17568 137 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 MDKP21741 143 aaPredicted RBP11.08□□□□□ -0.64
HMGN1-211ENST00000471260 CCL1P22362 96 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 SLC6A1P30531 599 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 HAAOP46952 286 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 ZNF85Q03923 595 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 CDK5R1Q15078 307 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 RPL22L1Q6P5R6 122 aaKnown RBP11.08□□□□□ -0.64
HMGN1-211ENST00000471260 Q8N7P7 452 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 OR14K1Q8NGZ2 314 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 PPP1R14AQ96A00 147 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 TTTY10Q9BZA0 68 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 METTL8Q9H825 291 aaKnown RBP11.08□□□□□ -0.64
HMGN1-211ENST00000471260 ISG20L2Q9H9L3 353 aaKnown RBP11.08□□□□□ -0.64
HMGN1-211ENST00000471260 ZNF222Q9UK12 451 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 MAB21L2Q9Y586 359 aa11.08□□□□□ -0.64
HMGN1-211ENST00000471260 A0A0B4J293 547 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 A0A0G2JK05 382 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 A0A1B0GTI1 187 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 A0A1W2PPH5 198 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 PDCD5O14737 125 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 GSTZ1O43708 216 aaPredicted RBP11.07□□□□□ -0.64
HMGN1-211ENST00000471260 KNG1P01042 644 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 UCHL1P09936 223 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms