RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 FABP5Q01469 135 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 RPS4Y2Q8TD47 263 aa6.14□□□□□ -1.43
BRCA1-210ENST00000471181 MS4A7Q9GZW8 240 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-210ENST00000471181 C6orf106Q9H6K1 298 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-210ENST00000471181 GEMIN7Q9H840 131 aaKnown RBP6.14□□□□□ -1.43
BRCA1-210ENST00000471181 SLC25A17O43808 307 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 SNRPCP09234 159 aaKnown RBP6.13□□□□□ -1.43
BRCA1-210ENST00000471181 RAB9AP51151 201 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 DLK1P80370 383 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 B4GALNT1Q00973 533 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 IL24Q13007 206 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 WIPI1Q5MNZ9 446 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-210ENST00000471181 PRSS42Q7Z5A4 293 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 WDFY1Q8IWB7 410 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 ARHGAP5-AS1Q96IT6 56 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 MRGPRX4Q96LA9 322 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 DUX5Q96PT3 197 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 LPAR3Q9UBY5 353 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 ALG1L2C9J202 215 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 PGA3P0DJD8 388 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 DAOP14920 347 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 CD22P20273 847 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 FECHP22830 423 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 MRPS11P82912 194 aaKnown RBP6.13□□□□□ -1.43
BRCA1-210ENST00000471181 LRRC75BQ2VPJ9 315 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 TMEM255AQ5JRV8 349 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 ZNF506Q5JVG8 444 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 FBXO46Q6PJ61 603 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-210ENST00000471181 OR4S2Q8NH73 311 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 ISOC2Q96AB3 205 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 TMEM38AQ9H6F2 299 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 CMC2Q9NRP2 79 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 PTGESO14684 152 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 CDK2AP2O75956 126 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 SFT2D2O95562 160 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 HAND1O96004 215 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 CD3EP07766 207 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 OR5AC1P0C628 307 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 RPS4XP62701 263 aaKnown RBP6.13□□□□□ -1.43
BRCA1-210ENST00000471181 CCSMST1Q4G0I0 132 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 CGB2Q6NT52 195 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 MTURNQ8N3F0 131 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 LILRA3Q8N6C8 439 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-210ENST00000471181 SLC37A2Q8TED4 501 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 ST8SIA1Q92185 356 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 RAX2Q96IS3 184 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 SDF2Q99470 211 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 WNT16Q9UBV4 365 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 FOXJ3Q9UPW0 622 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 HIGD1AQ9Y241 93 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 CCL26Q9Y258 94 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 HS3ST3A1Q9Y663 406 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 TJP1Q07157 1748 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 HMGN4O00479 90 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 RER1O15258 196 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 MYF5P13349 255 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 SPNP16150 400 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 PTGFRP43088 359 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 MMP15P51511 669 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 PKIAP61925 76 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 PSG6Q00889 435 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 C2orf83Q53S99 150 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 TMEM108Q6UXF1 575 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 FAM219AQ8IW50 185 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 CA13Q8N1Q1 262 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 PHLDA1Q8WV24 401 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-210ENST00000471181 SMIM19Q96E16 107 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 CXXC4Q9H2H0 198 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 GPR35Q9HC97 309 aa6.13□□□□□ -1.43
BRCA1-210ENST00000471181 DUOX1Q9NRD9 1551 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 TMEM272A0A1B0GTI8 110 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 TMEM210A6NLX4 147 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 H0Y8X5 98 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 FGF17O60258 216 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 VDAC1P21796 283 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 ZNF117Q03924 483 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 AQP6Q13520 282 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 ZNF56Q15929 161 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 AWAT1Q58HT5 328 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 TCTN3Q6NUS6 607 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 PTRH1Q86Y79 214 aaKnown RBP6.12□□□□□ -1.43
BRCA1-210ENST00000471181 MRPL43Q8N983 215 aaKnown RBP6.12□□□□□ -1.43
BRCA1-210ENST00000471181 OR4B1Q8NGF8 309 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 ALG14Q96F25 216 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 WNT5BQ9H1J7 359 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 EDA2RQ9HAV5 297 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 C1RLQ9NZP8 487 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 C10orf71Q711Q0 1435 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 A0A1B0GU03 582 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 PLPP1O14494 284 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 GP2P55259 537 aaKnown RBP6.12□□□□□ -1.43
BRCA1-210ENST00000471181 DSCR4P56555 118 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-210ENST00000471181 MPV17LQ2QL34 196 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 FAM74A4Q5TZK3 123 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 CLEC18BQ6UXF7 455 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 PCGF1Q9BSM1 259 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 ALKBH7Q9BT30 221 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-210ENST00000471181 PRR13Q9NZ81 148 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 CCL27Q9Y4X3 112 aa6.12□□□□□ -1.43
BRCA1-210ENST00000471181 LRP12Q9Y561 859 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms