RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ZNF146Q15072 292 aa14.83□□□□□ -0.04
NCKIPSD-209ENST00000470006 KRBOX4Q5JUW0 171 aa14.83□□□□□ -0.04
NCKIPSD-209ENST00000470006 SPIN3Q5JUX0 258 aa14.83□□□□□ -0.04
NCKIPSD-209ENST00000470006 UTF1Q5T230 341 aa14.83□□□□□ -0.04
NCKIPSD-209ENST00000470006 GIPC3Q8TF64 312 aa14.83□□□□□ -0.04
NCKIPSD-209ENST00000470006 C4orf3Q8WVX3 66 aa14.83□□□□□ -0.04
NCKIPSD-209ENST00000470006 TEX12Q9BXU0 123 aa14.83□□□□□ -0.04
NCKIPSD-209ENST00000470006 RRP9O43818 475 aaKnown RBP14.82□□□□□ -0.04
NCKIPSD-209ENST00000470006 OR2H2O95918 312 aa14.82□□□□□ -0.04
NCKIPSD-209ENST00000470006 ELANEP08246 267 aa14.82□□□□□ -0.04
NCKIPSD-209ENST00000470006 HCKP08631 526 aa14.82□□□□□ -0.04
NCKIPSD-209ENST00000470006 MAGEA2P43356 314 aa14.82□□□□□ -0.04
NCKIPSD-209ENST00000470006 ATP1B3P54709 279 aa14.82□□□□□ -0.04
NCKIPSD-209ENST00000470006 MADCAM1Q13477 382 aa14.82□□□□□ -0.04
NCKIPSD-209ENST00000470006 ZNF322Q6U7Q0 402 aaPredicted RBP14.82□□□□□ -0.04
NCKIPSD-209ENST00000470006 C16orf89Q6UX73 402 aa14.82□□□□□ -0.04
NCKIPSD-209ENST00000470006 ZNF429Q86V71 674 aa14.82□□□□□ -0.04
NCKIPSD-209ENST00000470006 LEAP2Q969E1 77 aa14.82□□□□□ -0.04
NCKIPSD-209ENST00000470006 ADI1Q9BV57 179 aa14.82□□□□□ -0.04
NCKIPSD-209ENST00000470006 A0A087X0M5 115 aa14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 A0A1B0GX30 115 aa14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 A0A1W2PPI3 338 aa14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 ZNF729A6NN14 1252 aaPredicted RBP14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 J3QR06 171 aa14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 SYT7O43581 403 aa14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 SRSF10O75494 262 aaKnown RBP14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 SASH3O75995 380 aa14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 RPP14O95059 124 aaKnown RBP14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 OR8U8P0C7N1 319 aa14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 ZNF44P15621 663 aa14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 PRDX6P30041 224 aa14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 RAB7AP51149 207 aa14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 CXCR4P61073 352 aa14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 DIAPH2-AS1Q14236 149 aa14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 MOB3BQ86TA1 216 aa14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 PGAM4Q8N0Y7 254 aa14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 ISYNA1Q9NPH2 558 aa14.81□□□□□ -0.04
NCKIPSD-209ENST00000470006 SAP30O75446 220 aa14.8□□□□□ -0.04
NCKIPSD-209ENST00000470006 VDAC1P21796 283 aa14.8□□□□□ -0.04
NCKIPSD-209ENST00000470006 RBP2P50120 134 aa14.8□□□□□ -0.04
NCKIPSD-209ENST00000470006 GNG10P50151 68 aa14.8□□□□□ -0.04
NCKIPSD-209ENST00000470006 FHL3Q13643 280 aa14.8□□□□□ -0.04
NCKIPSD-209ENST00000470006 LTC4SQ16873 150 aa14.8□□□□□ -0.04
NCKIPSD-209ENST00000470006 C17orf58Q2M2W7 97 aa14.8□□□□□ -0.04
NCKIPSD-209ENST00000470006 OR8H3Q8N146 312 aa14.8□□□□□ -0.04
NCKIPSD-209ENST00000470006 OR1N2Q8NGR9 330 aa14.8□□□□□ -0.04
NCKIPSD-209ENST00000470006 HAVCR2Q8TDQ0 301 aa14.8□□□□□ -0.04
NCKIPSD-209ENST00000470006 CNN2Q99439 309 aaKnown RBP14.8□□□□□ -0.04
NCKIPSD-209ENST00000470006 HYDINQ4G0P3 5121 aa14.8□□□□□ -0.04
NCKIPSD-209ENST00000470006 GP9P14770 177 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 SPNP16150 400 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 ATP6V1B2P21281 511 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 MTCP1P56278 107 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 ATXN7L3Q14CW9 347 aaPredicted RBP14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 SRSF7Q16629 238 aaKnown RBP eCLIP14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 TMEM236Q5W0B7 351 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 TGIF2LXQ8IUE1 241 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 OR10X1Q8NGY0 326 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 KIRREL1Q96J84 757 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 RASL11BQ9BPW5 248 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 CHST5Q9GZS9 411 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 ABCG5Q9H222 651 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 MAGIXQ9H6Y5 334 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 ZNF556Q9HAH1 456 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 HMG20AQ9NP66 347 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 KRT84Q9NSB2 600 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 LIN7CQ9NUP9 197 aaKnown RBP14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 TVP23BQ9NYZ1 205 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 OR6C3Q9NZP0 311 aa14.79□□□□□ -0.04
NCKIPSD-209ENST00000470006 IGHV3-72A0A0B4J1Y9 119 aa14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 KBTBD11-OT1A0A1B0GTJ5 212 aa14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 TRIM64CA6NLI5 447 aa14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 LDLRAD4O15165 306 aa14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 GLP1RP43220 463 aa14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 CDK5Q00535 292 aa14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 GABPB1Q06547 395 aaPredicted RBP14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 FAM98BQ52LJ0 330 aaKnown RBP14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 TMEM65Q6PI78 240 aa14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 Q6ZSR3 168 aa14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 YIPF7Q8N8F6 280 aa14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 RNF152Q8N8N0 203 aa14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 EAF1Q96JC9 268 aaPredicted RBP14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 OR5B12Q96R08 314 aa14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 EDA2RQ9HAV5 297 aa14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 PSG11Q9UQ72 335 aa14.78□□□□□ -0.04
NCKIPSD-209ENST00000470006 CCDC182A6NF36 153 aa14.77□□□□□ -0.05
NCKIPSD-209ENST00000470006 ZNF670-ZNF695F2Z2N8 137 aa14.77□□□□□ -0.05
NCKIPSD-209ENST00000470006 MPZL2O60487 215 aa14.77□□□□□ -0.05
NCKIPSD-209ENST00000470006 OCM2P0CE71 109 aa14.77□□□□□ -0.05
NCKIPSD-209ENST00000470006 OCMP0CE72 109 aaPredicted RBP14.77□□□□□ -0.05
NCKIPSD-209ENST00000470006 OSMP13725 252 aa14.77□□□□□ -0.05
NCKIPSD-209ENST00000470006 CCL1P22362 96 aa14.77□□□□□ -0.05
NCKIPSD-209ENST00000470006 ZNF616Q08AN1 781 aa14.77□□□□□ -0.05
NCKIPSD-209ENST00000470006 SLC35F2Q8IXU6 374 aa14.77□□□□□ -0.05
NCKIPSD-209ENST00000470006 DEFB107AQ8IZN7 70 aa14.77□□□□□ -0.05
NCKIPSD-209ENST00000470006 ZNF565Q8N9K5 539 aa14.77□□□□□ -0.05
NCKIPSD-209ENST00000470006 COQ2Q96H96 371 aa14.77□□□□□ -0.05
NCKIPSD-209ENST00000470006 TM2D3Q9BRN9 247 aa14.77□□□□□ -0.05
NCKIPSD-209ENST00000470006 PPIL3Q9H2H8 161 aaKnown RBP14.77□□□□□ -0.05
NCKIPSD-209ENST00000470006 IDI2-AS1Q9NZ38 188 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms